Strain Fitness in Caulobacter crescentus NA1000 around CCNA_R0047

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,179,536	-		CCNA_02035	0.48	-1.6
2,179,547	+		CCNA_02035	0.49	-1.7
2,179,547	+		CCNA_02035	0.49	-0.8
2,179,555	-		CCNA_02035	0.49	-2.4
2,179,555	-		CCNA_02035	0.49	-1.0
2,179,607	-		CCNA_02035	0.54	+2.6
2,179,703	-		CCNA_02035	0.62	-0.8
2,179,794	-		CCNA_02035	0.69	+0.8
2,179,813	-		CCNA_02035	0.71	-0.7
2,179,862	+		CCNA_02035	0.75	-0.6
2,179,870	-		CCNA_02035	0.75	-0.4
2,179,896	-		CCNA_02035	0.78	-0.5
2,179,906	+		CCNA_02035	0.78	-0.6
2,179,924	+		CCNA_02035	0.80	+0.1
2,179,925	+		CCNA_02035	0.80	+0.5
2,179,927	-		CCNA_02035	0.80	+1.0
2,179,989	+		CCNA_02035	0.85	-0.2
2,180,007	-		CCNA_02035	0.87	+0.4
2,180,007	-		CCNA_02035	0.87	-1.6
2,180,007	-		CCNA_02035	0.87	-1.6
2,180,007	-		CCNA_02035	0.87	+0.3
2,180,007	-		CCNA_02035	0.87	+0.6
2,180,141	-				-0.6
2,180,141	-				-0.9
2,180,265	-				+1.6
2,180,271	+				+1.4
2,180,296	+				-0.2
2,180,392	-				+0.7
2,180,394	+				+0.3
2,180,394	+				+0.1
2,180,394	+				-0.4
2,180,402	-				+0.8
2,180,470	+				-1.9
2,180,471	-				+1.6
2,180,471	-				-0.1
2,180,501	-		CCNA_R0047	0.43	+2.0
2,180,515	-		CCNA_R0047	0.61	-0.7
2,180,521	+		CCNA_R0047	0.69	-0.6
2,180,521	+		CCNA_R0047	0.69	-1.0
2,180,521	+		CCNA_R0047	0.69	-0.9
2,180,521	+		CCNA_R0047	0.69	-1.4
2,180,540	+				-0.9
2,180,542	+				+0.1
2,180,668	+				+1.1
2,180,668	+				+0.3
2,180,668	+				-1.9
2,180,676	-				+2.5
2,180,699	+		CCNA_02036	0.18	+0.1
2,180,723	+		CCNA_02036	0.26	+4.3
2,180,764	+		CCNA_02036	0.41	-0.4
2,180,771	+		CCNA_02036	0.43	-0.2
2,180,814	+		CCNA_02036	0.59	-1.4
2,180,832	-		CCNA_02036	0.65	+2.1
2,180,832	-		CCNA_02036	0.65	+1.9
2,180,858	+		CCNA_02036	0.75	+0.8
2,180,864	+		CCNA_02036	0.77	-1.4
2,180,866	-		CCNA_02036	0.77	+1.9
2,180,866	-		CCNA_02036	0.77	+1.5
2,180,943	-				+2.2
2,180,987	+				+0.6
2,180,987	+				-0.8
2,180,987	+				-0.3
2,180,995	-				+0.1
2,181,113	+				-0.9
2,181,139	+				-0.7
2,181,147	-				+3.1
2,181,184	-				+2.9
2,181,191	-				+3.3
2,181,218	+				+1.2
2,181,226	-				+1.7
2,181,230	+				+0.1
2,181,279	+				+0.3
2,181,289	+				-1.1
2,181,294	-				+2.9
2,181,349	-		CCNA_02037	0.12	+2.2
2,181,416	-		CCNA_02037	0.14	+4.6
2,181,422	-		CCNA_02037	0.15	+2.5