Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03860

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
4,022,094	-		CCNA_03858	0.77	+1.1
4,022,105	+		CCNA_03858	0.80	+2.1
4,022,113	-		CCNA_03858	0.81	+1.6
4,022,128	-		CCNA_03858	0.84	+1.4
4,022,150	+		CCNA_03858	0.89	+4.1
4,022,150	+		CCNA_03858	0.89	+3.9
4,022,150	+		CCNA_03858	0.89	+4.1
4,022,150	+		CCNA_03858	0.89	+3.7
4,022,174	+				+3.1
4,022,176	-				+0.9
4,022,189	-				-0.0
4,022,190	-				+0.9
4,022,197	-				-0.4
4,022,264	+				-0.2
4,022,272	-				+3.6
4,022,272	-				+2.2
4,022,277	+				-0.2
4,022,343	-		CCNA_03859	0.11	-0.2
4,022,343	-		CCNA_03859	0.11	-1.0
4,022,440	-		CCNA_03859	0.25	-0.8
4,022,440	-		CCNA_03859	0.25	-2.0
4,022,513	+		CCNA_03859	0.36	-0.8
4,022,521	-		CCNA_03859	0.37	-0.5
4,022,560	-		CCNA_03859	0.43	+0.0
4,022,577	+		CCNA_03859	0.45	+0.8
4,022,585	-		CCNA_03859	0.46	+0.8
4,022,585	-		CCNA_03859	0.46	-1.7
4,022,595	-		CCNA_03859	0.48	-0.8
4,022,605	-		CCNA_03859	0.49	+0.4
4,022,608	+		CCNA_03859	0.50	-0.6
4,022,676	-		CCNA_03859	0.60	+0.4
4,022,768	+		CCNA_03859	0.73	+2.4
4,022,778	+		CCNA_03859	0.75	+0.4
4,022,831	+		CCNA_03859	0.82	-0.8
4,022,868	+		CCNA_03859	0.88	+0.4
4,022,887	-				+0.8
4,022,928	+				+0.8
4,022,962	-				+1.2
4,022,976	-				-0.5
4,022,978	+				-0.6
4,022,984	+				-1.5
4,023,001	+				-0.5
4,023,001	+				-1.3
4,023,001	+				-1.6
4,023,001	+				-1.5
4,023,001	+				-1.3
4,023,001	+				+0.1
4,023,008	+				-1.1
4,023,009	-				-2.6
4,023,009	-				-1.3
4,023,009	-				+1.4
4,023,009	-				-1.2
4,023,009	-				+1.4
4,023,009	-				+0.4
4,023,089	+				+1.4
4,023,105	-		CCNA_03860	0.15	+1.8
4,023,105	-		CCNA_03860	0.15	-1.2
4,023,126	-		CCNA_03860	0.20	-1.0
4,023,138	+		CCNA_03860	0.22	-2.1
4,023,203	+		CCNA_03860	0.35	-1.8
4,023,215	+		CCNA_03860	0.37	+0.8
4,023,216	+		CCNA_03860	0.37	-1.1
4,023,223	-		CCNA_03860	0.39	-1.6
4,023,242	+		CCNA_03860	0.42	-1.5
4,023,261	-		CCNA_03860	0.46	-0.5
4,023,268	-		CCNA_03860	0.47	-1.1
4,023,330	-		CCNA_03860	0.60	-0.5
4,023,341	+		CCNA_03860	0.62	-0.1
4,023,341	+		CCNA_03860	0.62	+0.0
4,023,341	+		CCNA_03860	0.62	+1.4
4,023,349	-		CCNA_03860	0.63	-1.3
4,023,349	-		CCNA_03860	0.63	-0.7
4,023,349	-		CCNA_03860	0.63	-0.8
4,023,349	-		CCNA_03860	0.63	-1.2
4,023,356	-		CCNA_03860	0.65	+0.1
4,023,458	+		CCNA_03860	0.85	+1.4
4,023,461	-		CCNA_03860	0.85	+0.1
4,023,466	-		CCNA_03860	0.86	-1.8
4,023,483	-		CCNA_03860	0.90	+0.0
4,023,493	-				-1.3
4,023,581	-				-0.2
4,023,637	+		CCNA_03861	0.16	+0.4
4,023,679	+		CCNA_03861	0.22	+1.1
4,023,687	-		CCNA_03861	0.24	+0.6
4,023,823	-		CCNA_03861	0.44	-2.0
4,023,825	+		CCNA_03861	0.45	-0.2
4,023,827	+		CCNA_03861	0.45	+2.9
4,023,827	+		CCNA_03861	0.45	+0.5
4,023,827	+		CCNA_03861	0.45	-1.3
4,023,833	-		CCNA_03861	0.46	-0.6
4,023,956	+		CCNA_03861	0.65	-1.7
4,023,964	-		CCNA_03861	0.66	+1.4
4,023,972	+		CCNA_03861	0.67	-1.3
4,023,993	+		CCNA_03861	0.70	-0.6
4,024,042	-		CCNA_03861	0.78	+0.4
4,024,071	+		CCNA_03861	0.82	+2.4
4,024,085	+		CCNA_03861	0.85	-1.1
4,024,085	+		CCNA_03861	0.85	+1.4
4,024,085	+		CCNA_03861	0.85	-0.1
4,024,093	-		CCNA_03861	0.86	+0.8
4,024,135	+				+1.4
4,024,143	-				-0.5
4,024,195	+				+0.5
4,024,195	+				+1.4
4,024,195	+				-0.7
4,024,203	-				+0.7
4,024,203	-				+0.0
4,024,214	+				-0.2
4,024,244	-				+1.4