Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03698

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
3,864,298	-		CCNA_03696	0.81	-1.0
3,864,303	+		CCNA_03696	0.81	+0.8
3,864,316	-		CCNA_03696	0.82	-0.2
3,864,320	+		CCNA_03696	0.82	-0.7
3,864,325	+		CCNA_03696	0.82	+0.4
3,864,392	+		CCNA_03696	0.85	-0.8
3,864,402	+		CCNA_03696	0.86	+0.9
3,864,418	-		CCNA_03696	0.87	+1.1
3,864,431	+		CCNA_03696	0.87	+1.2
3,864,433	-		CCNA_03696	0.88	-0.4
3,864,442	+		CCNA_03696	0.88	-0.2
3,864,485	+				+0.8
3,864,522	+				-0.0
3,864,523	+				+2.2
3,864,531	-				+0.4
3,864,533	+				+0.8
3,864,538	+				-1.7
3,864,541	-				+3.4
3,864,541	-				+0.0
3,864,541	-				+0.0
3,864,542	-				-0.4
3,864,605	+				-0.1
3,864,613	+				-0.0
3,864,621	-				+0.6
3,864,627	+				+0.6
3,864,668	+				+2.0
3,864,691	+				-0.8
3,864,729	-				-0.2
3,864,765	+		CCNA_03697	0.10	+1.4
3,864,765	+		CCNA_03697	0.10	+0.2
3,864,765	+		CCNA_03697	0.10	+1.0
3,864,765	+		CCNA_03697	0.10	-0.4
3,864,765	+		CCNA_03697	0.10	+0.1
3,864,765	+		CCNA_03697	0.10	-1.8
3,864,773	-		CCNA_03697	0.12	-1.0
3,864,773	-		CCNA_03697	0.12	-1.0
3,864,773	-		CCNA_03697	0.12	-2.2
3,864,814	+		CCNA_03697	0.19	+0.8
3,864,822	-		CCNA_03697	0.20	+0.8
3,864,842	+		CCNA_03697	0.24	-1.3
3,864,845	-		CCNA_03697	0.25	+0.3
3,864,855	-		CCNA_03697	0.26	-1.2
3,864,886	-		CCNA_03697	0.32	-0.2
3,864,888	+		CCNA_03697	0.32	+0.8
3,864,909	+		CCNA_03697	0.36	-0.6
3,864,926	+		CCNA_03697	0.39	-0.4
3,864,964	+		CCNA_03697	0.46	+0.9
3,864,964	+		CCNA_03697	0.46	+2.8
3,864,964	+		CCNA_03697	0.46	-3.1
3,864,964	+		CCNA_03697	0.46	+0.2
3,864,964	+		CCNA_03697	0.46	+0.2
3,864,964	+		CCNA_03697	0.46	-1.2
3,864,964	+		CCNA_03697	0.46	-0.1
3,864,964	+		CCNA_03697	0.46	+1.1
3,864,972	-		CCNA_03697	0.47	-0.4
3,864,972	-		CCNA_03697	0.47	+0.0
3,864,972	-		CCNA_03697	0.47	+0.4
3,864,972	-		CCNA_03697	0.47	+2.4
3,864,972	-		CCNA_03697	0.47	-1.8
3,864,972	-		CCNA_03697	0.47	+0.0
3,864,972	-		CCNA_03697	0.47	+0.0
3,864,972	-		CCNA_03697	0.47	+1.2
3,864,972	-		CCNA_03697	0.47	-1.4
3,864,972	-		CCNA_03697	0.47	-1.6
3,864,995	-		CCNA_03697	0.51	-2.1
3,865,140	+		CCNA_03697	0.77	+0.0
3,865,147	+		CCNA_03697	0.79	+0.8
3,865,155	+		CCNA_03697	0.80	-1.3
3,865,155	-		CCNA_03697	0.80	-0.6
3,865,155	-		CCNA_03697	0.80	+0.8
3,865,163	-		CCNA_03697	0.82	-1.6
3,865,188	+		CCNA_03697	0.86	-1.1
3,865,195	+		CCNA_03697	0.87	-2.3
3,865,293	-				-0.6
3,865,301	-		CCNA_03698	0.12	+0.8
3,865,311	-		CCNA_03698	0.14	-1.1
3,865,346	+		CCNA_03698	0.22	-1.1
3,865,348	+		CCNA_03698	0.23	-1.0
3,865,356	-		CCNA_03698	0.24	-3.1
3,865,378	-		CCNA_03698	0.29	-0.3
3,865,383	+		CCNA_03698	0.31	-0.8
3,865,460	-		CCNA_03698	0.48	+0.5
3,865,481	-		CCNA_03698	0.53	+0.4
3,865,486	-		CCNA_03698	0.54	-1.0
3,865,551	-		CCNA_03698	0.69	+1.9
3,865,634	-		CCNA_03698	0.88	-1.6
3,865,735	+				+1.4
3,865,740	-				-0.6
3,865,761	-				-1.0
3,865,790	-				+0.4
3,865,821	-				-1.5
3,865,916	+				+3.0
3,865,929	-				-1.2
3,865,937	-				+0.0
3,865,970	-				-2.4
3,865,971	+				+0.0
3,865,977	-				+0.0
3,865,981	+				-1.2
3,865,990	-				-0.6
3,866,007	-				+0.8
3,866,023	+				-0.6
3,866,031	-				+0.6
3,866,056	-				-1.0
3,866,064	-		CCNA_03699	0.10	-1.0
3,866,064	-		CCNA_03699	0.10	-1.3
3,866,064	-		CCNA_03699	0.10	-0.6
3,866,087	+		CCNA_03699	0.11	-0.3
3,866,105	-		CCNA_03699	0.12	-0.5
3,866,111	+		CCNA_03699	0.12	-0.3
3,866,155	+		CCNA_03699	0.13	+0.8
3,866,194	+		CCNA_03699	0.15	-0.5
3,866,194	+		CCNA_03699	0.15	-1.7
3,866,194	+		CCNA_03699	0.15	+0.7
3,866,202	-		CCNA_03699	0.15	-1.8
3,866,202	-		CCNA_03699	0.15	+0.4
3,866,214	+		CCNA_03699	0.16	-0.6
3,866,227	+		CCNA_03699	0.16	-0.8
3,866,243	+		CCNA_03699	0.17	+0.2
3,866,251	-		CCNA_03699	0.17	-1.9
3,866,271	+		CCNA_03699	0.18	+0.1
3,866,298	-		CCNA_03699	0.18	+0.0
3,866,316	+		CCNA_03699	0.19	-2.0
3,866,332	-		CCNA_03699	0.20	-0.9
3,866,459	+		CCNA_03699	0.24	-2.4
3,866,467	-		CCNA_03699	0.24	+0.8
3,866,488	+		CCNA_03699	0.25	-0.4
3,866,488	+		CCNA_03699	0.25	+0.2
3,866,496	-		CCNA_03699	0.25	-0.6
3,866,518	+		CCNA_03699	0.26	-1.7
3,866,539	+		CCNA_03699	0.27	+2.4
3,866,547	-		CCNA_03699	0.27	-1.6
3,866,547	-		CCNA_03699	0.27	-2.0
3,866,549	+		CCNA_03699	0.27	+2.1
3,866,570	-		CCNA_03699	0.28	-0.9
3,866,587	+		CCNA_03699	0.29	-0.4
3,866,595	-		CCNA_03699	0.29	+3.9
3,866,605	-		CCNA_03699	0.29	-0.6
3,866,610	+		CCNA_03699	0.29	+0.7
3,866,636	+		CCNA_03699	0.30	+0.8
3,866,644	-		CCNA_03699	0.31	-1.0
3,866,651	-		CCNA_03699	0.31	+0.2