Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03620

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
3,774,695	+		CCNA_03619	0.57	+2.7
3,774,703	-		CCNA_03619	0.57	-1.3
3,774,703	-		CCNA_03619	0.57	-1.7
3,774,754	-		CCNA_03619	0.60	-1.0
3,774,770	+		CCNA_03619	0.60	+2.5
3,774,859	-		CCNA_03619	0.65	-0.9
3,774,892	+		CCNA_03619	0.66	+2.2
3,774,894	-		CCNA_03619	0.66	-1.6
3,774,912	+		CCNA_03619	0.67	+2.6
3,774,956	+				+4.2
3,774,964	-		CCNA_03619	0.69	+0.9
3,774,964	-		CCNA_03619	0.69	-1.1
3,774,964	-		CCNA_03619	0.69	-0.1
3,774,971	+		CCNA_03619	0.70	+2.8
3,774,971	+		CCNA_03619	0.70	+2.2
3,774,996	-		CCNA_03619	0.71	+0.1
3,775,008	-		CCNA_03619	0.72	+3.0
3,775,009	-		CCNA_03619	0.72	+2.9
3,775,053	+		CCNA_03619	0.74	+3.8
3,775,069	+		CCNA_03619	0.74	+2.8
3,775,199	-		CCNA_03619	0.81	+0.4
3,775,208	+		CCNA_03619	0.81	+2.2
3,775,241	+		CCNA_03619	0.83	+2.8
3,775,247	-		CCNA_03619	0.83	-0.7
3,775,249	-		CCNA_03619	0.83	-2.0
3,775,249	-		CCNA_03619	0.83	+0.1
3,775,257	-		CCNA_03619	0.83	+0.1
3,775,289	+		CCNA_03619	0.85	+3.0
3,775,304	-		CCNA_03619	0.86	+0.4
3,775,320	+		CCNA_03619	0.86	+2.9
3,775,372	+		CCNA_03619	0.89	+2.9
3,775,377	+		CCNA_03619	0.89	+2.4
3,775,385	-		CCNA_03619	0.89	-0.9
3,775,385	-		CCNA_03619	0.89	-0.8
3,775,385	-		CCNA_03619	0.89	+1.0
3,775,385	-		CCNA_03619	0.89	+0.7
3,775,385	-		CCNA_03619	0.89	-0.4
3,775,410	+				+3.2
3,775,418	-				-1.6
3,775,421	+				+3.3
3,775,428	-				+0.2
3,775,435	-				+2.9
3,775,456	+				+2.6
3,775,464	-				-1.0
3,775,494	+				+3.1
3,775,497	-				+0.9
3,775,502	-				+0.9
3,775,518	+				+3.5
3,775,526	-				+1.0
3,775,571	+				+3.2
3,775,571	+				+3.2
3,775,571	+				+3.2
3,775,571	+				+3.2
3,775,571	+				+3.5
3,775,579	-				+0.1
3,775,579	-				-1.4
3,775,579	-				-0.6
3,775,579	-				-2.0
3,775,579	-				+0.1
3,775,638	-				-1.1
3,775,673	+				-0.3
3,775,681	-				+0.7
3,775,694	-				+2.4
3,775,696	+				-0.6
3,775,789	+		CCNA_03620	0.14	-1.9
3,775,796	-		CCNA_03620	0.15	+1.2
3,775,826	-		CCNA_03620	0.19	-0.3
3,775,861	-		CCNA_03620	0.23	-0.8
3,775,868	+		CCNA_03620	0.24	+0.1
3,775,876	-		CCNA_03620	0.25	-1.0
3,775,876	-		CCNA_03620	0.25	+0.9
3,775,876	-		CCNA_03620	0.25	-0.6
3,775,876	-		CCNA_03620	0.25	+1.4
3,775,948	-		CCNA_03620	0.34	+2.4
3,775,951	+		CCNA_03620	0.34	-1.6
3,775,956	+		CCNA_03620	0.35	+0.9
3,775,958	-		CCNA_03620	0.35	-1.1
3,775,959	-		CCNA_03620	0.35	-2.3
3,775,966	+		CCNA_03620	0.36	-0.2
3,776,020	+		CCNA_03620	0.43	-2.1
3,776,064	+		CCNA_03620	0.48	+0.4
3,776,072	-		CCNA_03620	0.49	-2.3
3,776,082	+		CCNA_03620	0.51	-0.4
3,776,133	+		CCNA_03620	0.57	-1.4
3,776,170	-		CCNA_03620	0.62	+0.4
3,776,234	+		CCNA_03620	0.70	+0.4
3,776,239	+		CCNA_03620	0.70	-0.1
3,776,242	-		CCNA_03620	0.71	-0.3
3,776,247	-		CCNA_03620	0.71	-0.4
3,776,247	-		CCNA_03620	0.71	-1.3
3,776,247	-		CCNA_03620	0.71	+3.4
3,776,411	+				-1.3
3,776,543	-				-1.3
3,776,543	-				-0.7
3,776,586	-				-1.6
3,776,612	+				-1.0
3,776,639	-		CCNA_03621	0.12	-0.6
3,776,651	+		CCNA_03621	0.13	-1.4
3,776,651	+		CCNA_03621	0.13	-1.1
3,776,655	-		CCNA_03621	0.14	+1.1
3,776,664	-		CCNA_03621	0.15	-1.3
3,776,668	+		CCNA_03621	0.15	+0.4
3,776,678	-		CCNA_03621	0.17	-1.8
3,776,728	+		CCNA_03621	0.23	-0.1
3,776,747	+		CCNA_03621	0.25	+1.1
3,776,747	-		CCNA_03621	0.25	-2.0
3,776,749	+		CCNA_03621	0.25	-1.3
3,776,749	+		CCNA_03621	0.25	-1.0
3,776,755	-		CCNA_03621	0.26	-0.0
3,776,757	-		CCNA_03621	0.26	+1.6
3,776,757	-		CCNA_03621	0.26	-0.1
3,776,761	+		CCNA_03621	0.26	-0.3
3,776,761	+		CCNA_03621	0.26	+0.4
3,776,761	+		CCNA_03621	0.26	-0.7
3,776,761	+		CCNA_03621	0.26	-0.4
3,776,761	+		CCNA_03621	0.26	-0.6
3,776,769	-		CCNA_03621	0.27	+0.1
3,776,769	-		CCNA_03621	0.27	+0.3
3,776,769	-		CCNA_03621	0.27	-0.5
3,776,806	+		CCNA_03621	0.32	+0.1
3,776,924	+		CCNA_03621	0.46	-0.4
3,776,940	+		CCNA_03621	0.48	-0.6
3,776,948	-		CCNA_03621	0.49	-1.4
3,777,014	+		CCNA_03621	0.56	-0.7
3,777,047	-		CCNA_03621	0.60	+1.9
3,777,154	-		CCNA_03621	0.73	+1.4
3,777,154	-		CCNA_03621	0.73	+0.4
3,777,189	-		CCNA_03621	0.77	-0.8
3,777,191	+		CCNA_03621	0.77	-0.9
3,777,191	+		CCNA_03621	0.77	+0.1
3,777,199	+		CCNA_03621	0.78	-1.3
3,777,199	-		CCNA_03621	0.78	+0.1
3,777,207	-		CCNA_03621	0.79	-0.9
3,777,315	+				-1.6
3,777,315	+				+1.4
3,777,315	+				-2.3
3,777,345	+				-3.2
3,777,377	+				-0.4
3,777,392	-				-0.4
3,777,392	-				-0.8
3,777,394	+				-0.7
3,777,394	+				+0.1
3,777,399	+				-0.6
3,777,402	-				-0.6
3,777,402	-				-0.6
3,777,402	-				-1.6
3,777,407	-				-0.1
3,777,407	-				-0.1