Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03281

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
3,450,093	+		CCNA_03280	0.75	-0.5
3,450,103	-		CCNA_03280	0.76	+5.0
3,450,114	+		CCNA_03280	0.76	+3.2
3,450,122	-		CCNA_03280	0.76	+4.1
3,450,122	-		CCNA_03280	0.76	+4.4
3,450,122	-		CCNA_03280	0.76	+3.4
3,450,131	+		CCNA_03280	0.76	-1.1
3,450,139	-		CCNA_03280	0.77	+4.6
3,450,170	+		CCNA_03280	0.78	+1.8
3,450,170	+		CCNA_03280	0.78	-1.7
3,450,178	-		CCNA_03280	0.78	+4.6
3,450,178	-		CCNA_03280	0.78	+4.7
3,450,178	-		CCNA_03280	0.78	+4.6
3,450,178	-		CCNA_03280	0.78	+4.9
3,450,249	-		CCNA_03280	0.80	+4.2
3,450,249	-		CCNA_03280	0.80	+4.3
3,450,256	+		CCNA_03280	0.80	+1.6
3,450,318	+		CCNA_03280	0.82	+2.6
3,450,322	+		CCNA_03280	0.82	+0.6
3,450,326	-		CCNA_03280	0.82	+3.4
3,450,326	-		CCNA_03280	0.82	+4.4
3,450,330	+		CCNA_03280	0.82	-1.2
3,450,330	+		CCNA_03280	0.82	+1.0
3,450,338	-		CCNA_03280	0.82	+4.0
3,450,338	-		CCNA_03280	0.82	+4.4
3,450,338	-		CCNA_03280	0.82	+4.8
3,450,338	-		CCNA_03280	0.82	+4.3
3,450,338	-		CCNA_03280	0.82	+4.3
3,450,352	-		CCNA_03280	0.83	+4.3
3,450,353	-		CCNA_03280	0.83	+4.0
3,450,363	+		CCNA_03280	0.83	+1.6
3,450,371	-		CCNA_03280	0.83	+4.1
3,450,409	+		CCNA_03280	0.84	+0.8
3,450,411	+		CCNA_03280	0.85	-1.2
3,450,459	-		CCNA_03280	0.86	+4.2
3,450,482	+		CCNA_03280	0.87	-0.2
3,450,491	-		CCNA_03280	0.87	+4.2
3,450,491	-		CCNA_03280	0.87	+4.2
3,450,491	-		CCNA_03280	0.87	+4.5
3,450,518	+		CCNA_03280	0.88	+0.3
3,450,570	-		CCNA_03280	0.89	+4.1
3,450,622	+				-0.2
3,450,634	-				+4.4
3,450,647	-				+4.0
3,450,656	-				+4.3
3,450,670	+				-0.6
3,450,671	-				+4.2
3,450,703	-				+3.1
3,450,703	-				+4.3
3,450,725	-				+4.3
3,450,737	-				+3.7
3,450,738	+				+0.6
3,450,760	+				+0.6
3,450,791	+				-0.7
3,450,820	-				+4.6
3,450,845	+				+1.8
3,450,853	-				+4.4
3,450,863	-				+4.5
3,450,981	+				-0.5
3,450,988	-				+1.6
3,450,988	-				+2.4
3,450,988	-				-0.1
3,451,002	+				+4.3
3,451,141	+		CCNA_03281	0.11	+5.7
3,451,146	+		CCNA_03281	0.12	+4.8
3,451,151	+		CCNA_03281	0.13	+5.5
3,451,162	+		CCNA_03281	0.15	+5.4
3,451,166	+		CCNA_03281	0.16	+5.7
3,451,173	+		CCNA_03281	0.17	+5.5
3,451,173	+		CCNA_03281	0.17	+5.1
3,451,174	+		CCNA_03281	0.18	+5.6
3,451,179	+		CCNA_03281	0.19	+5.1
3,451,192	+		CCNA_03281	0.21	+5.8
3,451,231	+		CCNA_03281	0.29	+5.2
3,451,254	+		CCNA_03281	0.34	+5.7
3,451,270	+		CCNA_03281	0.37	+5.3
3,451,282	+		CCNA_03281	0.39	+5.5
3,451,282	+		CCNA_03281	0.39	+5.3
3,451,282	+		CCNA_03281	0.39	+5.1
3,451,290	+		CCNA_03281	0.41	+5.0
3,451,292	+		CCNA_03281	0.41	+5.4
3,451,292	+		CCNA_03281	0.41	+5.8
3,451,300	+		CCNA_03281	0.43	+5.5
3,451,331	+		CCNA_03281	0.49	+5.4
3,451,338	-		CCNA_03281	0.51	-0.6
3,451,339	+		CCNA_03281	0.51	+5.7
3,451,339	+		CCNA_03281	0.51	+5.6
3,451,371	+		CCNA_03281	0.57	+5.8
3,451,441	+		CCNA_03281	0.71	+5.5
3,451,441	+		CCNA_03281	0.71	+5.5
3,451,521	+		CCNA_03281	0.87	+5.4
3,451,529	+		CCNA_03281	0.89	+5.7
3,451,529	+		CCNA_03281	0.89	+5.6
3,451,553	+				+4.7
3,451,553	+				+4.8
3,451,558	+				+3.4
3,451,585	-				+1.6
3,451,620	-				-0.6
3,451,651	-				-0.2
3,451,684	+				-0.9
3,451,684	+				-0.4
3,451,692	-				+1.1
3,451,692	-				-2.1
3,451,754	+				-0.2
3,451,771	+				+0.3
3,451,771	+				-0.8
3,451,776	+				-0.7
3,451,779	-				+0.2
3,451,779	-				-0.2
3,451,779	-				+0.2
3,451,846	+				+1.0
3,451,867	+				-2.1
3,451,882	+				-1.9
3,451,882	+				+1.6
3,451,903	-		CCNA_03282	0.12	+0.1
3,451,903	-		CCNA_03282	0.12	+1.0
3,451,915	+		CCNA_03282	0.13	-1.2
3,451,937	-				+1.0
3,451,949	-		CCNA_03282	0.17	+0.3
3,451,961	-		CCNA_03282	0.18	-0.4
3,451,991	+		CCNA_03282	0.22	-0.7
3,451,991	+		CCNA_03282	0.22	-0.7
3,451,991	+		CCNA_03282	0.22	+0.0
3,451,991	+		CCNA_03282	0.22	+0.6
3,451,999	-		CCNA_03282	0.23	-0.4
3,451,999	-		CCNA_03282	0.23	+0.0
3,451,999	-		CCNA_03282	0.23	-2.1
3,451,999	-		CCNA_03282	0.23	-0.1
3,452,013	-		CCNA_03282	0.24	+2.6
3,452,016	+		CCNA_03282	0.25	+1.6
3,452,053	+		CCNA_03282	0.29	-0.5
3,452,070	-		CCNA_03282	0.31	+0.3
3,452,093	+		CCNA_03282	0.34	+1.4
3,452,093	+		CCNA_03282	0.34	-1.1
3,452,113	+		CCNA_03282	0.36	+0.0
3,452,120	+		CCNA_03282	0.37	+0.0
3,452,121	-		CCNA_03282	0.37	-1.5
3,452,121	-		CCNA_03282	0.37	+1.6
3,452,128	-		CCNA_03282	0.38	-0.4
3,452,153	+		CCNA_03282	0.40	-0.7
3,452,158	+		CCNA_03282	0.41	+1.3
3,452,158	+		CCNA_03282	0.41	-0.6
3,452,161	-		CCNA_03282	0.41	-0.7
3,452,166	-		CCNA_03282	0.42	+0.7
3,452,166	-		CCNA_03282	0.42	-1.3
3,452,166	-		CCNA_03282	0.42	+0.6
3,452,166	-		CCNA_03282	0.42	+1.6
3,452,166	-		CCNA_03282	0.42	+0.3
3,452,182	+		CCNA_03282	0.44	-0.3
3,452,200	+		CCNA_03282	0.46	-1.4
3,452,210	-		CCNA_03282	0.47	-1.5
3,452,323	+		CCNA_03282	0.60	+1.0
3,452,331	-		CCNA_03282	0.61	-0.6
3,452,472	+		CCNA_03282	0.77	-1.4
3,452,475	-		CCNA_03282	0.78	+0.6
3,452,482	+		CCNA_03282	0.78	-1.1
3,452,482	+		CCNA_03282	0.78	-1.7
3,452,482	+		CCNA_03282	0.78	+0.3
3,452,482	+		CCNA_03282	0.78	+1.2
3,452,482	+		CCNA_03282	0.78	+0.8
3,452,490	-		CCNA_03282	0.79	-0.2
3,452,490	-		CCNA_03282	0.79	+0.3
3,452,490	-		CCNA_03282	0.79	-2.3
3,452,490	-		CCNA_03282	0.79	-0.8
3,452,515	+		CCNA_03282	0.82	-0.4