Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03261

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
3,429,135	+		CCNA_03258	0.36	+1.9
3,429,143	-		CCNA_03258	0.39	-0.4
3,429,190	+		CCNA_03258	0.59	-0.7
3,429,206	+		CCNA_03258	0.65	+1.4
3,429,288	+				-0.2
3,429,373	+		CCNA_03259	0.19	+1.1
3,429,374	+		CCNA_03259	0.19	-1.2
3,429,382	-		CCNA_03259	0.21	+0.6
3,429,426	+		CCNA_03259	0.33	-0.5
3,429,435	-		CCNA_03259	0.35	+1.1
3,429,486	-		CCNA_03259	0.48	+0.5
3,429,494	+		CCNA_03259	0.51	-0.4
3,429,564	-		CCNA_03259	0.69	-0.4
3,429,575	-		CCNA_03259	0.72	+1.1
3,429,605	+		CCNA_03259	0.79	-1.6
3,429,605	+		CCNA_03259	0.79	+2.6
3,429,605	+		CCNA_03259	0.79	-1.1
3,429,605	+		CCNA_03259	0.79	-0.2
3,429,605	+		CCNA_03259	0.79	+0.6
3,429,605	+		CCNA_03259	0.79	-0.4
3,429,605	+		CCNA_03259	0.79	-0.7
3,429,605	+		CCNA_03259	0.79	-1.7
3,429,605	+		CCNA_03259	0.79	+0.6
3,429,605	+		CCNA_03259	0.79	+0.1
3,429,605	+		CCNA_03259	0.79	+0.6
3,429,605	+		CCNA_03259	0.79	+1.1
3,429,605	-		CCNA_03259	0.79	+1.0
3,429,613	-		CCNA_03259	0.82	+2.0
3,429,613	-		CCNA_03259	0.82	+0.7
3,429,613	-		CCNA_03259	0.82	+0.9
3,429,613	-		CCNA_03259	0.82	-0.9
3,429,613	-		CCNA_03259	0.82	+1.3
3,429,613	-		CCNA_03259	0.82	+0.9
3,429,613	-		CCNA_03259	0.82	+1.2
3,429,613	-		CCNA_03259	0.82	+1.7
3,429,613	-		CCNA_03259	0.82	+2.1
3,429,613	-				+1.6
3,429,613	-		CCNA_03259	0.82	+1.2
3,429,613	-		CCNA_03259	0.82	+1.5
3,429,613	-		CCNA_03259	0.82	+0.5
3,429,613	-		CCNA_03259	0.82	+0.6
3,429,613	-		CCNA_03259	0.82	+0.7
3,429,613	-		CCNA_03259	0.82	+2.8
3,429,613	-		CCNA_03259	0.82	+1.1
3,429,613	-		CCNA_03259	0.82	+1.4
3,429,613	-		CCNA_03259	0.82	+1.4
3,429,613	-		CCNA_03259	0.82	+1.2
3,429,613	-		CCNA_03259	0.82	+1.4
3,429,613	-		CCNA_03259	0.82	+0.6
3,429,613	-		CCNA_03259	0.82	+1.2
3,429,613	-		CCNA_03259	0.82	+0.3
3,429,613	-		CCNA_03259	0.82	+0.9
3,429,613	-		CCNA_03259	0.82	+0.9
3,429,613	-		CCNA_03259	0.82	+1.1
3,429,673	+				-1.7
3,429,704	-				-0.6
3,429,704	-				+0.1
3,429,723	-				-0.1
3,429,766	-		CCNA_03260	0.19	+1.6
3,429,827	-		CCNA_03260	0.36	-0.4
3,429,827	-		CCNA_03260	0.36	+1.1
3,429,855	-		CCNA_03260	0.43	-0.2
3,429,856	-		CCNA_03260	0.43	-0.2
3,429,951	-		CCNA_03260	0.69	+0.6
3,429,951	-		CCNA_03260	0.69	+1.2
3,429,951	-		CCNA_03260	0.69	+2.6
3,429,951	-		CCNA_03260	0.69	+2.0
3,430,060	+				-0.4
3,430,081	+				-0.9
3,430,090	-				-0.1
3,430,141	-				+2.2
3,430,254	+		CCNA_03261	0.19	+1.6
3,430,298	+		CCNA_03261	0.26	+1.1
3,430,298	+				+1.6
3,430,300	-		CCNA_03261	0.26	-1.7
3,430,368	+		CCNA_03261	0.37	-1.7
3,430,378	+		CCNA_03261	0.38	-0.5
3,430,386	-		CCNA_03261	0.40	+0.6
3,430,526	-		CCNA_03261	0.62	-0.2
3,430,563	-		CCNA_03261	0.68	+2.6
3,430,643	+		CCNA_03261	0.80	+0.1
3,430,656	-		CCNA_03261	0.82	-1.9
3,430,706	-				-0.7
3,430,757	+				+3.5
3,430,797	-				-1.6
3,430,804	+				+0.6
3,430,807	+				+1.3
3,430,812	-				+2.6
3,430,812	-				-1.5
3,430,812	-				-0.7
3,430,834	+				+1.1
3,430,834	+				+0.1
3,430,834	+				+0.6
3,430,842	-				+1.1
3,430,842	-		CCNA_03262	0.11	-1.1
3,430,853	+		CCNA_03262	0.12	+1.1
3,430,886	+		CCNA_03262	0.17	+2.6
3,430,894	-		CCNA_03262	0.18	-0.7
3,430,894	-		CCNA_03262	0.18	-0.2
3,430,941	+		CCNA_03262	0.24	+0.3
3,430,950	-		CCNA_03262	0.26	-1.7
3,430,950	-		CCNA_03262	0.26	-1.1
3,430,952	+		CCNA_03262	0.26	+0.6
3,430,952	+		CCNA_03262	0.26	+2.6
3,430,952	+		CCNA_03262	0.26	+1.1
3,430,954	+		CCNA_03262	0.26	-0.2
3,430,954	+		CCNA_03262	0.26	-0.7
3,430,954	+		CCNA_03262	0.26	-1.3
3,430,954	+				+2.6
3,430,960	-		CCNA_03262	0.27	+1.1
3,430,960	-		CCNA_03262	0.27	-0.7
3,430,960	-		CCNA_03262	0.27	+1.1
3,430,960	-		CCNA_03262	0.27	+1.6
3,430,960	-		CCNA_03262	0.27	+1.6
3,430,960	-		CCNA_03262	0.27	-1.2
3,430,960	-		CCNA_03262	0.27	+1.1
3,430,962	-		CCNA_03262	0.27	-1.5
3,430,962	-		CCNA_03262	0.27	+0.2
3,430,962	-		CCNA_03262	0.27	-1.2
3,430,974	-		CCNA_03262	0.29	-0.9
3,430,980	+		CCNA_03262	0.30	+0.1
3,430,983	-		CCNA_03262	0.30	+0.6
3,430,988	-		CCNA_03262	0.31	-1.3
3,431,022	+		CCNA_03262	0.35	+1.6
3,431,030	-		CCNA_03262	0.36	+1.3
3,431,042	+		CCNA_03262	0.38	+0.1
3,431,050	-		CCNA_03262	0.39	+1.6
3,431,075	-		CCNA_03262	0.43	+0.1
3,431,086	+		CCNA_03262	0.44	-0.1
3,431,157	-		CCNA_03262	0.54	+0.3
3,431,196	-		CCNA_03262	0.59	-0.9
3,431,213	-		CCNA_03262	0.62	+1.6
3,431,248	-		CCNA_03262	0.66	+2.6
3,431,285	-		CCNA_03262	0.71	-0.9
3,431,286	-		CCNA_03262	0.72	-1.8
3,431,372	-		CCNA_03262	0.83	-1.4
3,431,377	-		CCNA_03262	0.84	-1.5
3,431,377	-		CCNA_03262	0.84	-0.2
3,431,400	+		CCNA_03262	0.87	+0.1
3,431,400	+		CCNA_03262	0.87	-0.5
3,431,416	+		CCNA_03262	0.89	+0.3
3,431,434	+				+0.2
3,431,434	-				+0.3
3,431,442	-				+0.3
3,431,442	-				-0.8
3,431,499	+				-0.8
3,431,499	+				-0.1
3,431,499	+				+0.3
3,431,535	+				+0.3
3,431,535	+				+0.6
3,431,535	+				+0.3
3,431,535	+				-1.2
3,431,535	-				-0.4
3,431,535	-				-1.6
3,431,543	-				+1.3
3,431,543	-				+1.3
3,431,543	-				-1.2
3,431,543	-				+1.1
3,431,543	-				+0.6
3,431,561	+				-1.3
3,431,561	+				+1.6
3,431,569	-				-0.2
3,431,569	-				-1.5