Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02952

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
3,111,202	+				+0.4
3,111,208	+				-0.0
3,111,210	-				+0.7
3,111,282	+				+3.0
3,111,287	-		CCNA_02951	0.19	-0.5
3,111,305	-		CCNA_02951	0.22	+0.7
3,111,321	+		CCNA_02951	0.24	+1.0
3,111,324	-		CCNA_02951	0.25	-0.3
3,111,375	-		CCNA_02951	0.32	+0.2
3,111,392	+		CCNA_02951	0.34	+1.0
3,111,397	+		CCNA_02951	0.35	+0.9
3,111,405	-		CCNA_02951	0.36	+1.5
3,111,463	+		CCNA_02951	0.44	-0.7
3,111,463	+		CCNA_02951	0.44	+0.2
3,111,464	+		CCNA_02951	0.44	+2.0
3,111,480	-		CCNA_02951	0.47	+1.1
3,111,536	+		CCNA_02951	0.55	+0.4
3,111,556	+		CCNA_02951	0.57	+0.4
3,111,580	-		CCNA_02951	0.61	-1.3
3,111,585	+		CCNA_02951	0.62	+1.6
3,111,637	-		CCNA_02951	0.69	+1.4
3,111,648	+		CCNA_02951	0.70	+1.7
3,111,655	+		CCNA_02951	0.71	-1.3
3,111,655	+		CCNA_02951	0.71	+1.2
3,111,655	+		CCNA_02951	0.71	+1.5
3,111,655	+		CCNA_02951	0.71	+1.4
3,111,655	+		CCNA_02951	0.71	-1.3
3,111,655	+		CCNA_02951	0.71	-0.5
3,111,655	+		CCNA_02951	0.71	+0.4
3,111,657	+		CCNA_02951	0.72	-2.7
3,111,663	-		CCNA_02951	0.73	-0.2
3,111,663	-		CCNA_02951	0.73	+1.4
3,111,706	+		CCNA_02951	0.79	-0.5
3,111,714	-		CCNA_02951	0.80	+2.7
3,111,741	-		CCNA_02951	0.84	-2.3
3,111,741	-		CCNA_02951	0.84	+0.4
3,111,741	-		CCNA_02951	0.84	+0.8
3,111,759	+		CCNA_02951	0.86	+1.0
3,111,768	+		CCNA_02951	0.87	-1.1
3,111,776	-		CCNA_02951	0.89	+1.7
3,111,781	-		CCNA_02951	0.89	+0.7
3,111,830	-				-0.7
3,111,945	+				+0.7
3,111,973	+				+1.7
3,111,981	+				+0.7
3,111,981	+				-0.4
3,111,989	-				+1.2
3,111,989	-				-1.0
3,111,989	-				-0.2
3,111,994	+				+0.4
3,112,002	-				-0.5
3,112,002	-				-1.0
3,112,020	+				+0.3
3,112,030	+				+0.2
3,112,030	+				-2.1
3,112,038	-				-1.2
3,112,049	+				-0.5
3,112,051	+				+0.9
3,112,138	+		CCNA_02952	0.20	-1.5
3,112,160	-		CCNA_02952	0.37	-0.9
3,112,160	-		CCNA_02952	0.37	-0.2
3,112,268	+				+0.4
3,112,287	+				+2.0
3,112,336	+		CCNA_02953	0.10	+2.0
3,112,336	+		CCNA_02953	0.10	-0.9
3,112,341	+		CCNA_02953	0.11	-0.0
3,112,344	-		CCNA_02953	0.11	+2.4
3,112,344	-		CCNA_02953	0.11	-0.0
3,112,344	-		CCNA_02953	0.11	-0.3
3,112,344	-		CCNA_02953	0.11	+0.4
3,112,349	-		CCNA_02953	0.12	-1.2
3,112,351	+		CCNA_02953	0.12	+0.7
3,112,351	+		CCNA_02953	0.12	+0.2
3,112,351	+		CCNA_02953	0.12	-0.8
3,112,351	+		CCNA_02953	0.12	+2.0
3,112,363	+		CCNA_02953	0.13	+1.4
3,112,363	+		CCNA_02953	0.13	-0.3
3,112,371	-		CCNA_02953	0.14	+1.4
3,112,422	-		CCNA_02953	0.19	+0.8
3,112,478	+		CCNA_02953	0.25	+0.7
3,112,496	+		CCNA_02953	0.27	+2.0
3,112,504	-		CCNA_02953	0.28	+0.7
3,112,517	-		CCNA_02953	0.29	-1.3
3,112,522	-		CCNA_02953	0.30	+0.4
3,112,562	+		CCNA_02953	0.34	+2.4
3,112,570	-		CCNA_02953	0.35	+1.0
3,112,570	-		CCNA_02953	0.35	+1.0
3,112,588	+		CCNA_02953	0.36	+1.0
3,112,595	+		CCNA_02953	0.37	+1.4
3,112,684	+		CCNA_02953	0.46	+0.1
3,112,751	+		CCNA_02953	0.53	+1.4
3,112,817	+		CCNA_02953	0.60	-0.2
3,112,869	+		CCNA_02953	0.65	-0.7
3,112,870	+		CCNA_02953	0.66	+1.0
3,112,870	+		CCNA_02953	0.66	-1.7
3,112,870	+		CCNA_02953	0.66	-1.3
3,112,904	+		CCNA_02953	0.69	+1.4
3,112,923	-		CCNA_02953	0.71	+1.0
3,112,923	-		CCNA_02953	0.71	+3.0
3,113,015	+		CCNA_02953	0.80	+1.1
3,113,019	+		CCNA_02953	0.81	-0.0
3,113,088	+		CCNA_02953	0.88	-1.8
3,113,088	+		CCNA_02953	0.88	-0.8
3,113,088	-		CCNA_02953	0.88	+0.4
3,113,090	+		CCNA_02953	0.88	+1.5
3,113,105	+		CCNA_02953	0.90	-1.3
3,113,136	+				-1.4
3,113,163	+				-0.5
3,113,171	-				+0.7
3,113,197	+				+0.9
3,113,197	+				+0.5
3,113,197	+				-0.3
3,113,197	+				-0.9
3,113,197	+				+1.2
3,113,197	+				+1.2
3,113,205	-				+1.0
3,113,205	-				+0.2
3,113,205	-				-0.7
3,113,205	-				+2.4
3,113,205	-				+2.4
3,113,205	-				-1.9
3,113,205	-				+0.2
3,113,220	+				-1.4