Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02823

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,979,581	-				+2.9
2,979,589	-				+1.0
2,979,589	-				+1.5
2,979,798	+				+1.4
2,979,811	+				+0.4
2,979,816	+				+3.0
2,979,816	+				-0.2
2,979,818	+		CCNA_03979	0.58	-0.6
2,979,824	-		CCNA_03979	0.60	+3.2
2,979,829	-		CCNA_03979	0.63	-0.9
2,979,854	+		CCNA_03979	0.74	+1.0
2,979,873	+		CCNA_03979	0.82	-0.1
2,979,881	+		CCNA_03979	0.86	+0.2
2,979,932	-		CCNA_02823	0.16	-1.3
2,979,941	+		CCNA_02823	0.23	+0.2
2,979,941	+		CCNA_02823	0.23	-0.0
2,979,947	-		CCNA_02823	0.28	-1.3
2,979,970	+		CCNA_02823	0.46	-0.2
2,979,970	+		CCNA_02823	0.46	-0.8
2,979,970	+		CCNA_02823	0.46	+0.4
2,979,978	-		CCNA_02823	0.52	+1.4
2,979,999	-		CCNA_02823	0.69	-0.3
2,980,069	-				-2.2
2,980,100	+				+3.0
2,980,108	-				-1.3
2,980,108	-				-1.8
2,980,108	-				-1.2
2,980,108	-				-0.4
2,980,108	-				-0.0
2,980,138	-				+0.4
2,980,153	+				-0.0
2,980,153	+				+0.2
2,980,153	+				+0.6
2,980,153	+				-0.0
2,980,156	-				-0.5
2,980,156	-				+0.2
2,980,161	-				+0.6
2,980,168	+				-0.5
2,980,173	+				+0.6
2,980,178	+				+1.0
2,980,179	-				+1.0
2,980,203	-				-0.2
2,980,219	+				-0.1
2,980,259	+		CCNA_02824	0.10	+3.0
2,980,267	-		CCNA_02824	0.13	-0.8
2,980,267	-		CCNA_02824	0.13	-0.0
2,980,267	-		CCNA_02824	0.13	-0.4
2,980,303	-		CCNA_02824	0.23	+0.6
2,980,341	-		CCNA_02824	0.34	-1.2
2,980,341	-		CCNA_02824	0.34	+3.0
2,980,341	-		CCNA_02824	0.34	+1.0
2,980,343	+		CCNA_02824	0.34	+1.2
2,980,343	+		CCNA_02824	0.34	-0.4
2,980,349	-		CCNA_02824	0.36	+0.6
2,980,351	-		CCNA_02824	0.36	-1.3
2,980,359	-		CCNA_02824	0.39	-0.2
2,980,370	+		CCNA_02824	0.42	+1.0
2,980,423	-		CCNA_02824	0.57	-1.4
2,980,437	+		CCNA_02824	0.61	+1.4
2,980,469	+		CCNA_02824	0.70	+1.0
2,980,472	-		CCNA_02824	0.71	-0.0
2,980,472	-		CCNA_02824	0.71	-2.4
2,980,493	+		CCNA_02824	0.77	+0.4
2,980,505	+		CCNA_02824	0.80	-0.6
2,980,506	-		CCNA_02824	0.80	-0.5
2,980,521	-		CCNA_02824	0.84	+0.6
2,980,539	+		CCNA_02824	0.90	-0.2
2,980,553	+				+2.0
2,980,556	-				-0.5
2,980,586	+				+1.0
2,980,594	-				+0.6
2,980,595	+				+0.1
2,980,595	-				+1.9
2,980,629	+		CCNA_02825	0.11	+0.4
2,980,659	-		CCNA_02825	0.19	+2.6
2,980,659	-		CCNA_02825	0.19	+2.1
2,980,666	-		CCNA_02825	0.20	-1.3
2,980,679	-		CCNA_02825	0.24	-0.4
2,980,702	+		CCNA_02825	0.30	+1.4
2,980,715	+		CCNA_02825	0.33	-1.1
2,980,727	-		CCNA_02825	0.36	+1.9
2,980,738	-		CCNA_02825	0.39	+0.4
2,980,753	+		CCNA_02825	0.42	+0.6
2,980,760	-		CCNA_02825	0.44	+0.6
2,980,785	+		CCNA_02825	0.51	+1.4
2,980,785	+		CCNA_02825	0.51	-1.1
2,980,793	-		CCNA_02825	0.53	+2.4
2,980,835	+		CCNA_02825	0.63	+1.4
2,980,843	-		CCNA_02825	0.65	+0.2
2,980,877	+		CCNA_02825	0.74	-0.5
2,980,879	+		CCNA_02825	0.75	-0.5
2,980,879	+		CCNA_02825	0.75	+0.6
2,980,885	-		CCNA_02825	0.76	-0.6
2,980,885	-		CCNA_02825	0.76	-1.3
2,980,886	+		CCNA_02825	0.76	+0.1
2,980,887	-		CCNA_02825	0.77	+2.9
2,980,887	-		CCNA_02825	0.77	-1.5
2,980,887	-		CCNA_02825	0.77	+1.1
2,980,894	+		CCNA_02825	0.78	-0.1
2,980,917	+		CCNA_02825	0.84	+0.9
2,980,917	+		CCNA_02825	0.84	-0.2
2,980,917	+		CCNA_02825	0.84	-1.8
2,980,925	-		CCNA_02825	0.86	-0.1
2,980,960	+				+0.6
2,980,968	-				-0.2
2,980,988	+				+0.9
2,980,996	-				+0.1
2,981,006	-				-0.1
2,981,025	+				+0.4
2,981,035	+				+1.6
2,981,035	+				+2.5