Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02770

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,929,195	+		CCNA_02768	0.78	+0.4
2,929,195	+		CCNA_02768	0.78	-1.4
2,929,195	+		CCNA_02768	0.78	-0.0
2,929,203	-		CCNA_02768	0.79	+1.4
2,929,203	-		CCNA_02768	0.79	-1.5
2,929,203	-		CCNA_02768	0.79	-0.5
2,929,215	-		CCNA_02768	0.80	-0.7
2,929,316	-				-0.8
2,929,316	-				+0.6
2,929,329	-				-0.0
2,929,355	-				+0.6
2,929,415	-				+1.4
2,929,442	-				-1.6
2,929,442	-				-1.0
2,929,455	+				+2.0
2,929,463	-				-0.6
2,929,487	-		CCNA_02769	0.10	-0.5
2,929,490	+		CCNA_02769	0.11	+0.6
2,929,498	-		CCNA_02769	0.12	+0.4
2,929,531	+		CCNA_02769	0.16	+0.2
2,929,539	-		CCNA_02769	0.17	-2.1
2,929,562	+		CCNA_02769	0.20	+1.4
2,929,571	-		CCNA_02769	0.21	-0.4
2,929,611	+		CCNA_02769	0.26	+0.4
2,929,619	-		CCNA_02769	0.27	-0.8
2,929,619	-		CCNA_02769	0.27	-1.7
2,929,619	-		CCNA_02769	0.27	-0.4
2,929,650	+		CCNA_02769	0.32	-0.5
2,929,686	+		CCNA_02769	0.36	-0.2
2,929,700	+		CCNA_02769	0.38	+0.6
2,929,700	+		CCNA_02769	0.38	+0.8
2,929,700	+		CCNA_02769	0.38	+1.7
2,929,702	+		CCNA_02769	0.38	+1.1
2,929,708	-		CCNA_02769	0.39	+1.4
2,929,708	-		CCNA_02769	0.39	-0.2
2,929,708	-		CCNA_02769	0.39	+0.6
2,929,708	-		CCNA_02769	0.39	+0.2
2,929,717	+		CCNA_02769	0.40	-1.6
2,929,743	-		CCNA_02769	0.44	-0.0
2,929,751	-		CCNA_02769	0.45	-0.4
2,929,757	+		CCNA_02769	0.45	+1.4
2,929,784	+		CCNA_02769	0.49	-0.4
2,929,784	+		CCNA_02769	0.49	-0.8
2,929,789	+		CCNA_02769	0.50	+0.6
2,929,792	-		CCNA_02769	0.50	+0.8
2,929,792	-		CCNA_02769	0.50	-1.0
2,929,792	-		CCNA_02769	0.50	-0.8
2,929,798	+		CCNA_02769	0.51	-0.5
2,929,798	+		CCNA_02769	0.51	+1.6
2,929,811	-				+2.0
2,929,863	+		CCNA_02769	0.59	+2.0
2,929,876	-		CCNA_02769	0.61	-0.9
2,929,877	+		CCNA_02769	0.61	+1.0
2,929,882	+		CCNA_02769	0.62	-0.7
2,929,926	-		CCNA_02769	0.68	-0.0
2,929,930	+		CCNA_02769	0.68	+0.2
2,929,935	+		CCNA_02769	0.69	-0.0
2,929,971	+		CCNA_02769	0.73	+0.6
2,929,976	+		CCNA_02769	0.74	+0.4
2,929,976	+		CCNA_02769	0.74	+1.4
2,929,976	+		CCNA_02769	0.74	+2.0
2,929,976	+		CCNA_02769	0.74	+1.6
2,929,984	-		CCNA_02769	0.75	+2.0
2,929,984	-		CCNA_02769	0.75	-0.2
2,929,984	-		CCNA_02769	0.75	-0.3
2,930,023	+		CCNA_02769	0.80	-1.3
2,930,023	+		CCNA_02769	0.80	+0.6
2,930,024	+		CCNA_02769	0.80	+1.0
2,930,033	+		CCNA_02769	0.82	+3.0
2,930,055	+		CCNA_02769	0.84	+2.0
2,930,091	+		CCNA_02769	0.89	-2.2
2,930,091	+		CCNA_02769	0.89	-0.7
2,930,091	+		CCNA_02769	0.89	+0.2
2,930,091	+		CCNA_02769	0.89	-1.0
2,930,091	+		CCNA_02769	0.89	+1.0
2,930,091	+		CCNA_02769	0.89	-0.5
2,930,091	+		CCNA_02769	0.89	-0.8
2,930,091	+		CCNA_02769	0.89	-1.4
2,930,091	+		CCNA_02769	0.89	+2.0
2,930,091	+		CCNA_02769	0.89	-0.2
2,930,091	+		CCNA_02769	0.89	+1.4
2,930,091	+		CCNA_02769	0.89	-0.4
2,930,091	+		CCNA_02769	0.89	+2.0
2,930,091	+				+2.0
2,930,091	+		CCNA_02769	0.89	-0.2
2,930,091	+		CCNA_02769	0.89	+0.6
2,930,099	-				+0.2
2,930,099	-				-0.0
2,930,099	-				+1.0
2,930,099	-				+1.0
2,930,099	-				-1.3
2,930,099	-				+0.4
2,930,099	-				-0.0
2,930,099	-				-0.9
2,930,099	-				+2.0
2,930,099	-				-1.3
2,930,147	+				-1.5
2,930,147	+				-1.3
2,930,147	+				+1.6
2,930,147	+				-0.5
2,930,150	-				+2.0
2,930,155	-				+1.4
2,930,155	-				-0.2
2,930,175	+				-0.5
2,930,175	+				+0.6
2,930,175	+				+2.2
2,930,180	+				-0.2
2,930,183	-				+2.0
2,930,183	-				+0.4
2,930,197	+				-0.4
2,930,197	+				-1.3
2,930,197	+				-0.7
2,930,197	+				-0.4
2,930,197	+				-0.5
2,930,197	+				+1.0
2,930,197	+				+1.4
2,930,205	-				+1.1
2,930,205	-				+1.0
2,930,205	-				-0.7
2,930,205	-				+0.3
2,930,205	-				-0.5
2,930,205	-				-0.2
2,930,214	+				+1.4
2,930,243	+				-0.1
2,930,243	+				-0.3
2,930,243	+				-0.0
2,930,243	+				-1.2
2,930,243	+				+1.3
2,930,245	+				+2.6
2,930,245	+				+2.8
2,930,251	-				+0.6
2,930,251	-				-0.2
2,930,251	-				+1.0
2,930,251	-				+0.2
2,930,251	-				-0.0
2,930,251	-				+0.6
2,930,251	-				-0.8
2,930,253	-				-0.7
2,930,312	+				-0.2
2,930,320	-		CCNA_02770	0.11	+1.0
2,930,337	+		CCNA_02770	0.12	+1.4
2,930,370	-		CCNA_02770	0.14	+1.4
2,930,377	+		CCNA_02770	0.15	+0.4
2,930,427	-		CCNA_02770	0.18	-0.1
2,930,545	+		CCNA_02770	0.27	-1.1
2,930,545	+		CCNA_02770	0.27	-0.9
2,930,553	-		CCNA_02770	0.28	+0.6
2,930,638	-		CCNA_02770	0.34	+1.4
2,930,643	-		CCNA_02770	0.34	-1.0
2,930,734	-		CCNA_02770	0.41	+1.4
2,930,736	-		CCNA_02770	0.41	-1.6
2,930,739	+		CCNA_02770	0.41	+1.4
2,930,787	+		CCNA_02770	0.45	+0.4
2,930,843	+		CCNA_02770	0.49	+0.1
2,930,852	+		CCNA_02770	0.50	+0.9
2,930,861	+		CCNA_02770	0.50	+1.5
2,930,862	-		CCNA_02770	0.51	-0.4
2,930,872	+		CCNA_02770	0.51	-0.8
2,930,873	-		CCNA_02770	0.51	-2.0
2,930,912	-		CCNA_02770	0.54	+0.9
2,930,913	-		CCNA_02770	0.54	+2.9
2,930,919	-		CCNA_02770	0.55	+1.9
2,930,919	-		CCNA_02770	0.55	+1.4
2,931,010	-		CCNA_02770	0.61	-0.4
2,931,010	-		CCNA_02770	0.61	+0.4
2,931,011	+		CCNA_02770	0.62	-0.2
2,931,015	+		CCNA_02770	0.62	-0.8
2,931,023	+		CCNA_02770	0.62	-0.6
2,931,023	+		CCNA_02770	0.62	+0.9
2,931,023	+		CCNA_02770	0.62	-0.2
2,931,031	-		CCNA_02770	0.63	+1.9
2,931,089	-		CCNA_02770	0.67	+2.1
2,931,107	+		CCNA_02770	0.69	+2.4
2,931,115	-		CCNA_02770	0.69	+1.9
2,931,128	-		CCNA_02770	0.70	+1.0
2,931,134	-		CCNA_02770	0.71	+1.9
2,931,140	+		CCNA_02770	0.71	+2.2
2,931,191	+		CCNA_02770	0.75	-1.1
2,931,248	+		CCNA_02770	0.79	-0.1
2,931,256	-		CCNA_02770	0.80	+0.9
2,931,286	+		CCNA_02770	0.82	-1.0
2,931,310	+		CCNA_02770	0.84	+2.6
2,931,310	+		CCNA_02770	0.84	+1.8
2,931,318	-		CCNA_02770	0.84	+0.4
2,931,325	-		CCNA_02770	0.85	+0.4
2,931,330	+		CCNA_02770	0.85	-2.0
2,931,356	+		CCNA_02770	0.87	+0.4
2,931,356	+		CCNA_02770	0.87	+1.4
2,931,364	-		CCNA_02770	0.88	+0.1
2,931,364	-		CCNA_02770	0.88	+1.4
2,931,407	+				-0.5
2,931,427	-				+1.7
2,931,460	+				+1.1
2,931,484	-				-0.6
2,931,493	-				-1.5
2,931,493	-				-0.4
2,931,493	-				-1.8
2,931,498	-				-1.9
2,931,527	-				+1.5
2,931,527	-				+2.6
2,931,527	-				+2.4
2,931,527	-				+1.6
2,931,527	-				+2.2
2,931,535	-				+0.1
2,931,535	-				-0.5