Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02649

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,802,182	-				+0.7
2,802,187	-				-0.6
2,802,189	+				+0.4
2,802,189	+				-0.9
2,802,207	-				+1.1
2,802,219	-				-0.1
2,802,275	-				-0.6
2,802,312	-				+1.7
2,802,312	-				-0.4
2,802,326	+		CCNA_02648	0.10	+2.7
2,802,361	+		CCNA_02648	0.14	-0.9
2,802,413	-		CCNA_02648	0.20	+1.7
2,802,448	-		CCNA_02648	0.23	+0.7
2,802,485	+		CCNA_02648	0.27	+1.4
2,802,485	+		CCNA_02648	0.27	+2.1
2,802,493	-		CCNA_02648	0.28	-0.3
2,802,504	+		CCNA_02648	0.30	-0.1
2,802,550	+		CCNA_02648	0.35	+0.4
2,802,581	-		CCNA_02648	0.38	+0.7
2,802,586	-		CCNA_02648	0.38	+0.1
2,802,625	+		CCNA_02648	0.43	-1.4
2,802,679	+		CCNA_02648	0.49	+1.1
2,802,715	+		CCNA_02648	0.52	-0.3
2,802,717	+		CCNA_02648	0.53	-0.9
2,802,717	+		CCNA_02648	0.53	-0.4
2,802,735	+		CCNA_02648	0.55	-0.3
2,802,772	+		CCNA_02648	0.59	-0.1
2,802,782	+		CCNA_02648	0.60	-1.2
2,802,885	-		CCNA_02648	0.71	+1.7
2,802,887	+		CCNA_02648	0.71	-0.3
2,802,926	-		CCNA_02648	0.75	-1.0
2,802,926	-		CCNA_02648	0.75	-2.0
2,802,991	-		CCNA_02648	0.82	-1.4
2,803,020	+		CCNA_02648	0.86	+0.2
2,803,063	+				+1.9
2,803,076	+				-1.9
2,803,084	-				-0.8
2,803,143	-				-0.3
2,803,154	-				-0.6
2,803,210	-				-1.4
2,803,226	+				-1.1
2,803,257	+		CCNA_02649	0.13	+1.4
2,803,271	-		CCNA_02649	0.15	+0.9
2,803,374	+		CCNA_02649	0.32	+2.7
2,803,382	-		CCNA_02649	0.33	-1.0
2,803,382	-		CCNA_02649	0.33	-0.7
2,803,414	-		CCNA_02649	0.39	-1.0
2,803,478	-		CCNA_02649	0.49	-0.3
2,803,510	+		CCNA_02649	0.54	-0.4
2,803,512	-		CCNA_02649	0.55	-0.4
2,803,520	+		CCNA_02649	0.56	+0.4
2,803,520	+		CCNA_02649	0.56	-0.6
2,803,621	+		CCNA_02649	0.72	-1.5
2,803,722	+		CCNA_02649	0.89	+0.1
2,803,723	-		CCNA_02649	0.89	-1.1
2,803,742	+				-0.3
2,803,742	+				+2.7
2,803,747	+				-0.6
2,803,750	-				+1.5
2,803,859	-				-0.1
2,803,936	+		CCNA_02650	0.20	-0.1
2,803,936	+		CCNA_02650	0.20	+1.1
2,803,944	-		CCNA_02650	0.21	-0.3
2,803,944	-		CCNA_02650	0.21	+1.1
2,803,944	-		CCNA_02650	0.21	-0.4
2,803,944	-		CCNA_02650	0.21	+1.7
2,803,988	+		CCNA_02650	0.27	-0.7
2,803,994	+		CCNA_02650	0.28	-0.1
2,804,048	-		CCNA_02650	0.36	+0.1
2,804,127	+		CCNA_02650	0.46	+1.1
2,804,199	-		CCNA_02650	0.56	-0.3
2,804,199	-		CCNA_02650	0.56	+1.1
2,804,211	+		CCNA_02650	0.58	+2.7
2,804,211	+		CCNA_02650	0.58	-0.9
2,804,219	-		CCNA_02650	0.59	+1.1
2,804,282	-		CCNA_02650	0.68	+0.4
2,804,368	-		CCNA_02650	0.79	+0.1
2,804,443	-		CCNA_02650	0.90	+0.1
2,804,461	-				+0.1
2,804,473	-				+1.1
2,804,495	+				-1.9
2,804,555	+				+1.7
2,804,556	-				-1.6
2,804,585	-				+0.4
2,804,595	+				-1.0
2,804,605	+		CCNA_02651	0.10	-1.2
2,804,651	+		CCNA_02651	0.15	-2.2
2,804,653	-		CCNA_02651	0.16	-1.2
2,804,670	-		CCNA_02651	0.17	-0.1
2,804,687	-		CCNA_02651	0.19	+0.7
2,804,715	+		CCNA_02651	0.22	-0.1
2,804,738	-		CCNA_02651	0.25	-2.3
2,804,760	-		CCNA_02651	0.28	-0.6
2,804,767	+		CCNA_02651	0.28	-0.9
2,804,767	+		CCNA_02651	0.28	+0.4