Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02627

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,776,698	+				+3.4
2,776,715	-				-0.0
2,776,745	+				+0.6
2,776,753	+				+0.4
2,776,769	-				+0.2
2,776,775	-				-0.2
2,776,780	+				-1.7
2,776,801	+				-1.1
2,776,815	+				+0.5
2,776,886	+				-0.4
2,776,886	+				-0.2
2,776,901	-				+2.5
2,776,901	-				+0.2
2,776,945	+				+0.2
2,776,968	+				+1.8
2,776,976	-				+1.7
2,776,982	+				-1.3
2,777,005	-				+0.7
2,777,006	-				-0.2
2,777,022	+				+0.8
2,777,030	-				-1.9
2,777,046	+				-0.9
2,777,054	-		CCNA_02627	0.10	+0.4
2,777,150	+		CCNA_02627	0.17	-0.0
2,777,160	+		CCNA_02627	0.18	+1.8
2,777,160	+		CCNA_02627	0.18	-0.4
2,777,168	-		CCNA_02627	0.19	-1.4
2,777,168	-		CCNA_02627	0.19	-0.1
2,777,168	-		CCNA_02627	0.19	+0.2
2,777,204	-		CCNA_02627	0.21	+0.9
2,777,241	+		CCNA_02627	0.24	+2.8
2,777,241	+		CCNA_02627	0.24	+1.8
2,777,275	-		CCNA_02627	0.26	+0.2
2,777,288	+		CCNA_02627	0.27	-0.0
2,777,294	-		CCNA_02627	0.28	+0.4
2,777,294	-		CCNA_02627	0.28	-0.8
2,777,322	+		CCNA_02627	0.30	+0.2
2,777,349	-		CCNA_02627	0.31	-0.4
2,777,359	-				+1.8
2,777,385	+				+2.8
2,777,424	+		CCNA_02627	0.37	+0.4
2,777,467	+		CCNA_02627	0.40	+2.8
2,777,475	-		CCNA_02627	0.40	+2.2
2,777,475	-		CCNA_02627	0.40	+2.6
2,777,475	-		CCNA_02627	0.40	+2.2
2,777,477	+		CCNA_02627	0.41	-0.5
2,777,480	-		CCNA_02627	0.41	+0.3
2,777,485	-		CCNA_02627	0.41	+1.2
2,777,485	-		CCNA_02627	0.41	-1.2
2,777,485	-		CCNA_02627	0.41	-1.9
2,777,523	+		CCNA_02627	0.44	+0.6
2,777,523	+		CCNA_02627	0.44	-0.8
2,777,553	+		CCNA_02627	0.46	-1.9
2,777,571	-		CCNA_02627	0.47	-1.6
2,777,581	+		CCNA_02627	0.48	-1.3
2,777,582	-		CCNA_02627	0.48	+1.4
2,777,605	-		CCNA_02627	0.50	+2.9
2,777,630	-		CCNA_02627	0.51	-1.2
2,777,640	-		CCNA_02627	0.52	+1.1
2,777,669	+		CCNA_02627	0.54	-0.9
2,777,672	+		CCNA_02627	0.54	-0.0
2,777,697	+		CCNA_02627	0.56	-0.0
2,777,705	+		CCNA_02627	0.57	-0.9
2,777,741	+		CCNA_02627	0.59	+1.0
2,777,749	-		CCNA_02627	0.60	-0.7
2,777,810	+		CCNA_02627	0.64	+1.2
2,777,839	+		CCNA_02627	0.66	+0.2
2,777,853	-		CCNA_02627	0.67	-0.3
2,777,862	+		CCNA_02627	0.68	+1.2
2,777,862	+		CCNA_02627	0.68	+1.8
2,777,892	+		CCNA_02627	0.70	-1.6
2,777,892	+		CCNA_02627	0.70	+1.2
2,777,910	+		CCNA_02627	0.71	+0.2
2,777,910	+		CCNA_02627	0.71	+0.4
2,777,910	+		CCNA_02627	0.71	+0.8
2,777,910	+		CCNA_02627	0.71	-0.2
2,777,918	-		CCNA_02627	0.72	-0.8
2,777,918	-		CCNA_02627	0.72	-1.8
2,777,918	-		CCNA_02627	0.72	+0.4
2,777,918	-		CCNA_02627	0.72	-1.3
2,777,918	-		CCNA_02627	0.72	+1.2
2,777,918	-		CCNA_02627	0.72	-0.9
2,777,918	-		CCNA_02627	0.72	-1.2
2,777,918	-		CCNA_02627	0.72	-2.1
2,777,933	-		CCNA_02627	0.73	-0.7
2,777,966	+		CCNA_02627	0.75	+1.2
2,777,974	-		CCNA_02627	0.76	+1.0
2,777,974	-		CCNA_02627	0.76	+0.2
2,777,994	-		CCNA_02627	0.77	-0.4
2,778,008	-		CCNA_02627	0.78	+2.3
2,778,039	-		CCNA_02627	0.81	-1.6
2,778,040	-		CCNA_02627	0.81	+1.4
2,778,042	+		CCNA_02627	0.81	+1.2
2,778,060	+		CCNA_02627	0.82	+2.8
2,778,060	+		CCNA_02627	0.82	-1.1
2,778,068	-		CCNA_02627	0.83	-1.6
2,778,068	-		CCNA_02627	0.83	-0.2
2,778,068	-		CCNA_02627	0.83	-1.7
2,778,077	+		CCNA_02627	0.83	+0.8
2,778,084	+		CCNA_02627	0.84	-0.4
2,778,084	+		CCNA_02627	0.84	-0.6
2,778,084	+		CCNA_02627	0.84	+1.2
2,778,084	+		CCNA_02627	0.84	+0.3
2,778,084	+		CCNA_02627	0.84	+2.8
2,778,092	-		CCNA_02627	0.84	-1.0
2,778,092	-		CCNA_02627	0.84	+1.8
2,778,100	-		CCNA_02627	0.85	-0.0
2,778,102	+		CCNA_02627	0.85	-0.8
2,778,107	+		CCNA_02627	0.85	-0.0
2,778,107	+		CCNA_02627	0.85	+1.8
2,778,114	+		CCNA_02627	0.86	+2.8
2,778,114	+		CCNA_02627	0.86	-0.4
2,778,115	-		CCNA_02627	0.86	+1.1
2,778,122	-		CCNA_02627	0.87	+0.5
2,778,122	-		CCNA_02627	0.87	-0.9
2,778,204	+				+1.0
2,778,212	-				-0.6
2,778,228	+				+1.0
2,778,228	+				-0.0
2,778,235	+				+1.6
2,778,236	+				-0.4
2,778,236	-				+0.8
2,778,244	-				-0.2
2,778,259	+				+2.8
2,778,305	+				+1.8
2,778,326	-				-0.4
2,778,403	+				+0.2
2,778,403	+				+1.2
2,778,403	+				+2.0
2,778,406	+				+2.2
2,778,411	-				+0.6
2,778,411	-				-0.7
2,778,430	-				+1.0
2,778,440	-				-1.6
2,778,498	+				+0.2
2,778,500	+				+1.2
2,778,506	-				+2.6
2,778,513	+				+0.2
2,778,518	+				+0.8
2,778,532	-				+1.6
2,778,534	+				+0.4
2,778,534	-				+2.7