Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02490

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,636,777	+		CCNA_02488	0.53	+0.8
2,636,788	+		CCNA_02488	0.55	-0.4
2,636,798	+		CCNA_02488	0.56	+1.8
2,636,817	+		CCNA_02488	0.59	+2.8
2,636,958	-		CCNA_02488	0.78	+1.5
2,636,966	+		CCNA_02488	0.79	+1.2
2,636,967	-		CCNA_02488	0.79	+0.2
2,636,985	+		CCNA_02488	0.81	-0.5
2,637,017	+		CCNA_02488	0.86	-0.2
2,637,095	-				-2.2
2,637,102	+				-0.2
2,637,122	-				+2.8
2,637,123	+				+2.8
2,637,255	-		CCNA_02489	0.21	-0.6
2,637,281	-		CCNA_02489	0.25	+1.2
2,637,307	+		CCNA_02489	0.29	-0.9
2,637,310	-		CCNA_02489	0.29	-0.4
2,637,313	+		CCNA_02489	0.30	+1.8
2,637,315	-		CCNA_02489	0.30	+1.2
2,637,316	-		CCNA_02489	0.30	-1.3
2,637,318	+		CCNA_02489	0.30	+0.8
2,637,326	-		CCNA_02489	0.32	+1.2
2,637,326	-		CCNA_02489	0.32	+0.8
2,637,341	+		CCNA_02489	0.34	+0.2
2,637,341	+		CCNA_02489	0.34	-0.4
2,637,349	-		CCNA_02489	0.35	+0.2
2,637,349	-		CCNA_02489	0.35	+1.8
2,637,349	-		CCNA_02489	0.35	+0.8
2,637,355	+		CCNA_02489	0.36	-0.2
2,637,372	-		CCNA_02489	0.39	-0.2
2,637,376	+		CCNA_02489	0.39	+1.2
2,637,376	+		CCNA_02489	0.39	-1.8
2,637,376	+		CCNA_02489	0.39	-1.4
2,637,376	+		CCNA_02489	0.39	+0.9
2,637,384	-		CCNA_02489	0.41	-0.4
2,637,384	-		CCNA_02489	0.41	+1.8
2,637,384	-		CCNA_02489	0.41	+0.5
2,637,384	-		CCNA_02489	0.41	+0.0
2,637,384	-		CCNA_02489	0.41	+0.2
2,637,384	-		CCNA_02489	0.41	+0.2
2,637,384	-		CCNA_02489	0.41	+0.2
2,637,393	+		CCNA_02489	0.42	-0.4
2,637,401	-		CCNA_02489	0.43	-1.6
2,637,494	-		CCNA_02489	0.58	+0.2
2,637,563	+		CCNA_02489	0.68	+1.2
2,637,568	+		CCNA_02489	0.69	+0.2
2,637,581	-		CCNA_02489	0.71	+1.0
2,637,588	-		CCNA_02489	0.72	-1.3
2,637,601	+		CCNA_02489	0.74	+1.8
2,637,603	-		CCNA_02489	0.74	+0.6
2,637,608	-		CCNA_02489	0.75	+1.2
2,637,608	-		CCNA_02489	0.75	+1.1
2,637,609	-		CCNA_02489	0.75	-1.4
2,637,660	+		CCNA_02489	0.83	+0.5
2,637,677	+		CCNA_02489	0.86	+0.2
2,637,698	+		CCNA_02489	0.89	+0.5
2,637,706	-				-0.8
2,637,706	-				+0.0
2,637,706	-				-0.8
2,637,719	+				+0.2
2,637,734	-				+0.2
2,637,752	-				-1.6
2,638,283	+		CCNA_02490	0.43	+3.8
2,638,302	+		CCNA_02490	0.45	+0.0
2,638,312	+		CCNA_02490	0.46	-2.0
2,638,516	+		CCNA_02490	0.63	-0.7
2,638,524	+		CCNA_02490	0.63	-1.5
2,638,547	+		CCNA_02490	0.65	-0.5
2,638,549	-		CCNA_02490	0.65	+1.8
2,638,550	-		CCNA_02490	0.65	-0.8
2,638,924	+				-0.5
2,638,941	+				+2.8
2,639,028	+				+1.2
2,639,028	+				+0.2
2,639,034	+				+1.8
2,639,036	-				-0.9
2,639,036	-				-0.8
2,639,084	-		CCNA_02491	0.16	-0.4
2,639,088	-		CCNA_02491	0.16	+0.5
2,639,088	-		CCNA_02491	0.16	+0.0
2,639,162	+		CCNA_02491	0.27	+0.5
2,639,162	+		CCNA_02491	0.27	-0.8
2,639,162	+		CCNA_02491	0.27	-2.1
2,639,162	+		CCNA_02491	0.27	-0.6
2,639,162	+		CCNA_02491	0.27	-1.1
2,639,162	+		CCNA_02491	0.27	-0.6
2,639,162	+		CCNA_02491	0.27	-0.6
2,639,162	+		CCNA_02491	0.27	+0.2
2,639,162	+		CCNA_02491	0.27	+0.2
2,639,170	-		CCNA_02491	0.28	-1.3
2,639,232	+		CCNA_02491	0.36	-0.6
2,639,232	+		CCNA_02491	0.36	+1.8
2,639,234	+		CCNA_02491	0.37	+1.8
2,639,242	-		CCNA_02491	0.38	-0.6
2,639,269	-		CCNA_02491	0.42	+1.8
2,639,269	-		CCNA_02491	0.42	-0.6
2,639,295	+		CCNA_02491	0.45	+1.8
2,639,362	-		CCNA_02491	0.55	+0.6
2,639,393	+		CCNA_02491	0.59	-0.4
2,639,465	-		CCNA_02491	0.69	+0.2
2,639,484	+		CCNA_02491	0.72	+0.0
2,639,492	-		CCNA_02491	0.73	-0.5
2,639,492	-		CCNA_02491	0.73	+0.8
2,639,562	+		CCNA_02491	0.83	-0.4
2,639,562	+		CCNA_02491	0.83	+0.0
2,639,597	+		CCNA_02491	0.88	-1.6
2,639,600	+		CCNA_02491	0.88	-0.3
2,639,605	-		CCNA_02491	0.89	-0.2
2,639,605	-		CCNA_02491	0.89	-0.4
2,639,608	-		CCNA_02491	0.90	-0.9
2,639,612	+				-1.6
2,639,612	+				-1.2
2,639,634	-				-1.0
2,639,639	-				+0.8
2,639,641	+				+1.1
2,639,645	+				+0.8
2,639,653	-				-1.1
2,639,668	+				+2.8
2,639,698	-				+1.2
2,639,725	-				-0.2
2,639,761	+		CCNA_02492	0.13	-0.4
2,639,776	-		CCNA_02492	0.16	+0.8
2,639,786	-		CCNA_02492	0.17	+0.8
2,639,786	-		CCNA_02492	0.17	+0.0
2,639,795	-		CCNA_02492	0.19	+0.5
2,639,800	-		CCNA_02492	0.19	-0.4
2,639,800	-		CCNA_02492	0.19	+0.2
2,639,800	-		CCNA_02492	0.19	-1.4
2,639,836	-		CCNA_02492	0.25	+4.4
2,639,838	+		CCNA_02492	0.25	+0.5
2,639,838	+		CCNA_02492	0.25	+0.8
2,639,846	-		CCNA_02492	0.26	+1.2
2,639,846	-		CCNA_02492	0.26	+1.8
2,639,853	-		CCNA_02492	0.27	+0.8
2,639,857	+		CCNA_02492	0.28	-0.9
2,639,857	+		CCNA_02492	0.28	+0.2
2,639,857	+		CCNA_02492	0.28	-0.2
2,639,857	+		CCNA_02492	0.28	-1.9
2,639,857	+		CCNA_02492	0.28	+0.5
2,639,857	+		CCNA_02492	0.28	-0.8
2,639,857	+		CCNA_02492	0.28	+0.0
2,639,865	-		CCNA_02492	0.29	-1.8
2,639,865	-		CCNA_02492	0.29	+1.2
2,639,888	-		CCNA_02492	0.33	+1.0
2,639,888	-		CCNA_02492	0.33	+1.2
2,639,920	+		CCNA_02492	0.38	-1.7
2,639,928	-		CCNA_02492	0.39	+0.0
2,639,930	-		CCNA_02492	0.39	+0.0
2,639,940	+		CCNA_02492	0.41	+1.2