Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02455

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,595,729	-		CCNA_02454	0.77	-0.6
2,595,817	-		CCNA_02454	0.79	+0.1
2,595,854	-		CCNA_02454	0.80	+1.2
2,595,854	-		CCNA_02454	0.80	-0.6
2,595,854	-		CCNA_02454	0.80	-0.2
2,595,854	-		CCNA_02454	0.80	-0.1
2,595,854	-		CCNA_02454	0.80	-0.0
2,595,868	+		CCNA_02454	0.81	+0.8
2,595,899	-		CCNA_02454	0.82	-0.0
2,595,901	+		CCNA_02454	0.82	-0.0
2,595,944	-		CCNA_02454	0.83	-0.3
2,595,946	+		CCNA_02454	0.83	-1.6
2,595,946	+		CCNA_02454	0.83	+0.4
2,595,954	-		CCNA_02454	0.83	+0.6
2,595,959	-		CCNA_02454	0.83	-1.1
2,595,965	+		CCNA_02454	0.83	+0.8
2,595,988	+		CCNA_02454	0.84	+1.5
2,596,017	-		CCNA_02454	0.85	+0.8
2,596,095	+		CCNA_02454	0.87	+1.2
2,596,105	-		CCNA_02454	0.87	-0.9
2,596,170	-				+1.8
2,596,170	-		CCNA_02454	0.89	-0.1
2,596,176	+				+3.8
2,596,186	-		CCNA_02454	0.90	-1.0
2,596,219	+				-0.0
2,596,219	+				+2.8
2,596,249	+				+2.8
2,596,262	-				+1.2
2,596,294	-				-0.7
2,596,295	-				-1.7
2,596,394	+				+0.2
2,596,402	-				-0.7
2,596,402	-				-0.2
2,596,438	+				-0.4
2,596,459	+				-1.1
2,596,488	-				-3.0
2,596,500	-				+1.8
2,596,561	+				-1.3
2,596,569	-				+0.2
2,596,569	-				-0.6
2,596,569	-				-0.9
2,596,606	+				-1.1
2,596,650	-				-0.2
2,596,661	-				-1.1
2,596,700	-				+0.2
2,596,701	+				+1.2
2,596,723	+				+0.2
2,596,743	+				-0.7
2,596,768	+		CCNA_02455	0.14	+1.2
2,596,785	-		CCNA_02455	0.17	+0.4
2,596,799	+		CCNA_02455	0.19	-0.2
2,596,829	+		CCNA_02455	0.24	-1.5
2,596,837	-		CCNA_02455	0.26	-0.4
2,596,897	+		CCNA_02455	0.36	+0.8
2,596,897	-		CCNA_02455	0.36	+1.2
2,596,897	-		CCNA_02455	0.36	-1.0
2,596,931	+		CCNA_02455	0.42	-0.6
2,596,978	+		CCNA_02455	0.50	+0.8
2,596,996	-		CCNA_02455	0.53	-1.7
2,596,996	-		CCNA_02455	0.53	-1.7
2,597,001	-		CCNA_02455	0.54	-1.5
2,597,010	+		CCNA_02455	0.56	-1.4
2,597,010	+		CCNA_02455	0.56	+0.8
2,597,055	-		CCNA_02455	0.64	+0.8
2,597,055	-		CCNA_02455	0.64	+1.2
2,597,060	-		CCNA_02455	0.64	-0.2
2,597,064	-		CCNA_02455	0.65	-1.3
2,597,122	-		CCNA_02455	0.75	-1.4
2,597,127	-		CCNA_02455	0.76	-0.4
2,597,143	-		CCNA_02455	0.79	+0.4
2,597,186	+		CCNA_02455	0.86	-0.2
2,597,193	+		CCNA_02455	0.88	-0.0
2,597,250	-				+0.9
2,597,314	-				+1.7
2,597,340	+				-1.6
2,597,353	-				+1.4
2,597,369	+				-0.7
2,597,403	-				+3.8
2,597,444	+				-2.5
2,597,451	+				+3.8
2,597,452	-				+2.5
2,597,452	-				+3.0
2,597,452	-				+2.7
2,597,452	-				+3.2
2,597,452	-				+3.4
2,597,452	-				+2.5
2,597,452	-				+4.2
2,597,452	-				+3.2
2,597,452	-				+3.2
2,597,468	-				+4.2
2,597,468	-				+3.9
2,597,476	-				-0.7
2,597,492	+				-0.2
2,597,500	-				+2.2
2,597,507	-				+1.8
2,597,508	+				+0.8
2,597,514	+				+0.0
2,597,515	+				-0.7
2,597,522	+				+0.2
2,597,523	-				-1.0
2,597,523	-				+0.9
2,597,523	-				+0.5
2,597,523	-				-1.2
2,597,526	+				-0.4
2,597,528	-				-0.7
2,597,553	-				+0.4
2,597,565	+				+0.0
2,597,570	+				-0.0
2,597,573	-				+0.3
2,597,575	+				+0.8
2,597,578	-				-2.0
2,597,578	-				-0.1
2,597,584	+				-0.8
2,597,592	-				+0.4
2,597,606	-				+1.8
2,597,614	-				-1.2
2,597,617	+				+0.4
2,597,627	-				+0.4
2,597,675	-		CCNA_02456	0.10	+1.2
2,597,703	-		CCNA_02456	0.14	-0.4
2,597,736	-		CCNA_02456	0.18	-0.6
2,597,786	+		CCNA_02456	0.25	-2.2
2,597,898	+		CCNA_02456	0.40	-0.4
2,597,940	+		CCNA_02456	0.46	-0.0
2,597,948	-		CCNA_02456	0.47	+0.4
2,597,948	-		CCNA_02456	0.47	+0.8
2,597,999	+		CCNA_02456	0.54	-0.1
2,598,007	-		CCNA_02456	0.55	-1.3
2,598,008	-		CCNA_02456	0.55	+0.4
2,598,053	-		CCNA_02456	0.61	+0.6
2,598,054	+		CCNA_02456	0.62	-1.0
2,598,067	-		CCNA_02456	0.63	-0.6
2,598,104	+		CCNA_02456	0.68	-0.1
2,598,110	+		CCNA_02456	0.69	+1.8
2,598,136	-		CCNA_02456	0.73	-0.9
2,598,165	-		CCNA_02456	0.77	+1.8
2,598,186	-		CCNA_02456	0.79	+0.6
2,598,188	+		CCNA_02456	0.80	-1.0
2,598,196	-		CCNA_02456	0.81	-0.2
2,598,207	-		CCNA_02456	0.82	-1.1
2,598,212	+		CCNA_02456	0.83	+0.2
2,598,220	-		CCNA_02456	0.84	+1.8
2,598,244	+		CCNA_02456	0.87	+0.5