Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02412

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,555,201	-				-0.1
2,555,215	+				-1.1
2,555,222	-		CCNA_02411	0.10	-1.9
2,555,252	+		CCNA_02411	0.14	+1.7
2,555,257	-		CCNA_02411	0.14	-0.4
2,555,277	+		CCNA_02411	0.16	-1.3
2,555,285	-		CCNA_02411	0.17	+1.3
2,555,286	-		CCNA_02411	0.18	-0.3
2,555,302	-		CCNA_02411	0.19	-0.1
2,555,321	-		CCNA_02411	0.22	-0.9
2,555,421	-		CCNA_02411	0.33	-1.3
2,555,423	+		CCNA_02411	0.33	-1.5
2,555,479	+		CCNA_02411	0.40	+0.1
2,555,487	-		CCNA_02411	0.41	-0.5
2,555,527	+		CCNA_02411	0.45	-0.7
2,555,529	-		CCNA_02411	0.46	-0.8
2,555,582	+		CCNA_02411	0.52	+0.4
2,555,582	+		CCNA_02411	0.52	+1.1
2,555,582	+		CCNA_02411	0.52	+0.4
2,555,582	+		CCNA_02411	0.52	-2.6
2,555,590	-		CCNA_02411	0.53	-1.3
2,555,590	-		CCNA_02411	0.53	-1.0
2,555,590	-		CCNA_02411	0.53	-0.9
2,555,590	-		CCNA_02411	0.53	+1.4
2,555,590	-		CCNA_02411	0.53	+1.1
2,555,590	-		CCNA_02411	0.53	-0.2
2,555,609	+		CCNA_02411	0.55	-0.9
2,555,626	+		CCNA_02411	0.57	-0.3
2,555,628	+		CCNA_02411	0.57	-0.6
2,555,628	+		CCNA_02411	0.57	+0.2
2,555,636	-		CCNA_02411	0.58	-1.0
2,555,636	-		CCNA_02411	0.58	+0.1
2,555,658	-		CCNA_02411	0.60	+1.9
2,555,723	+		CCNA_02411	0.68	+0.7
2,555,763	+		CCNA_02411	0.73	-1.0
2,555,771	-		CCNA_02411	0.73	-0.3
2,555,771	-		CCNA_02411	0.73	+0.1
2,555,771	-		CCNA_02411	0.73	+1.1
2,555,795	-		CCNA_02411	0.76	-1.2
2,555,816	+		CCNA_02411	0.79	-1.8
2,555,821	+		CCNA_02411	0.79	-0.1
2,555,829	-		CCNA_02411	0.80	+0.3
2,555,829	-		CCNA_02411	0.80	+0.1
2,555,834	+		CCNA_02411	0.81	-0.9
2,555,861	+		CCNA_02411	0.84	+1.7
2,555,869	-		CCNA_02411	0.85	+0.7
2,555,965	+				-0.7
2,555,972	+				+0.7
2,555,973	-				-1.3
2,556,001	+				+0.4
2,556,003	+				-0.3
2,556,003	+				+0.6
2,556,003	+				+0.7
2,556,006	-				+1.3
2,556,011	-				-0.9
2,556,011	-				-0.7
2,556,011	-				-1.7
2,556,011	-				+1.3
2,556,011	-				+2.0
2,556,075	-				-1.1
2,556,198	-				-0.7
2,556,227	+				-0.1
2,556,227	+				-0.1
2,556,237	+				+0.1
2,556,245	-				-0.8
2,556,266	-		CCNA_02412	0.10	+0.4
2,556,278	+		CCNA_02412	0.12	-1.3
2,556,278	+		CCNA_02412	0.12	+0.1
2,556,283	+		CCNA_02412	0.12	-0.6
2,556,286	-		CCNA_02412	0.13	+0.1
2,556,286	-		CCNA_02412	0.13	-0.8
2,556,291	-		CCNA_02412	0.14	+1.5
2,556,302	+		CCNA_02412	0.15	+0.1
2,556,320	-		CCNA_02412	0.18	+0.7
2,556,336	-		CCNA_02412	0.20	+1.1
2,556,336	-		CCNA_02412	0.20	+0.1
2,556,396	+		CCNA_02412	0.28	-1.4
2,556,409	-		CCNA_02412	0.30	+0.1
2,556,446	-		CCNA_02412	0.35	+4.3
2,556,468	+		CCNA_02412	0.38	+2.7
2,556,489	+		CCNA_02412	0.41	+0.4
2,556,489	+		CCNA_02412	0.41	+0.1
2,556,489	+		CCNA_02412	0.41	-0.1
2,556,497	-		CCNA_02412	0.42	-1.4
2,556,519	+		CCNA_02412	0.45	-1.0
2,556,520	+		CCNA_02412	0.45	-0.1
2,556,551	-		CCNA_02412	0.50	-0.5
2,556,612	+		CCNA_02412	0.58	+2.7
2,556,638	-		CCNA_02412	0.62	-0.1
2,556,667	+		CCNA_02412	0.66	-0.1
2,556,667	+		CCNA_02412	0.66	-0.6
2,556,694	-		CCNA_02412	0.69	-0.0
2,556,701	-		CCNA_02412	0.70	+2.7
2,556,712	-		CCNA_02412	0.72	+1.1
2,556,712	-		CCNA_02412	0.72	+1.5
2,556,718	+		CCNA_02412	0.73	-0.7
2,556,718	+		CCNA_02412	0.73	+0.1
2,556,718	+		CCNA_02412	0.73	+1.1
2,556,723	+		CCNA_02412	0.73	-0.3
2,556,726	+		CCNA_02412	0.74	+0.7
2,556,736	-		CCNA_02412	0.75	-1.9
2,556,749	-		CCNA_02412	0.77	+1.1
2,556,751	+		CCNA_02412	0.77	+0.1
2,556,751	+		CCNA_02412	0.77	-1.0
2,556,751	+		CCNA_02412	0.77	+0.7
2,556,759	-		CCNA_02412	0.78	-0.7
2,556,759	-		CCNA_02412	0.78	-0.1
2,556,759	-		CCNA_02412	0.78	-0.3
2,556,759	-		CCNA_02412	0.78	-0.4
2,556,759	-		CCNA_02412	0.78	-0.3
2,556,759	-		CCNA_02412	0.78	-1.4
2,556,759	-		CCNA_02412	0.78	-1.1
2,556,759	-		CCNA_02412	0.78	-1.4
2,556,933	+				+4.6
2,556,947	-				+2.0
2,557,007	+				-0.6
2,557,015	-				+0.9
2,557,015	-				+1.7
2,557,015	-				+0.2
2,557,015	-				+0.5
2,557,015	-				+1.3
2,557,026	-				+2.3
2,557,050	-				+1.2
2,557,137	-		CCNA_02413	0.12	+0.4
2,557,214	+		CCNA_02413	0.18	+2.1
2,557,215	-		CCNA_02413	0.18	+2.7
2,557,215	-		CCNA_02413	0.18	+2.0
2,557,222	+		CCNA_02413	0.19	-1.1
2,557,223	+		CCNA_02413	0.19	+0.4
2,557,224	+		CCNA_02413	0.19	+1.1
2,557,224	+		CCNA_02413	0.19	-0.1
2,557,230	-		CCNA_02413	0.20	+3.0
2,557,231	-		CCNA_02413	0.20	-0.3
2,557,231	-		CCNA_02413	0.20	-0.9
2,557,231	-		CCNA_02413	0.20	+1.2
2,557,236	-		CCNA_02413	0.20	-0.1
2,557,267	-		CCNA_02413	0.23	+1.3
2,557,286	+		CCNA_02413	0.25	-0.1
2,557,286	+		CCNA_02413	0.25	+0.6
2,557,286	+		CCNA_02413	0.25	+0.4
2,557,286	+		CCNA_02413	0.25	+1.1
2,557,286	+		CCNA_02413	0.25	+0.9
2,557,294	-		CCNA_02413	0.25	+1.6
2,557,294	-		CCNA_02413	0.25	+1.3
2,557,294	-		CCNA_02413	0.25	+0.4
2,557,320	+		CCNA_02413	0.27	-2.6
2,557,321	+		CCNA_02413	0.28	-0.3
2,557,324	-		CCNA_02413	0.28	-0.0
2,557,328	-		CCNA_02413	0.28	-1.7
2,557,339	+		CCNA_02413	0.29	+0.1
2,557,367	+		CCNA_02413	0.32	-2.9
2,557,367	+				+1.7
2,557,373	+		CCNA_02413	0.32	-0.1
2,557,374	-		CCNA_02413	0.32	-0.7
2,557,375	-		CCNA_02413	0.32	+1.4
2,557,375	-		CCNA_02413	0.32	+1.6
2,557,378	+		CCNA_02413	0.32	+0.4
2,557,381	-		CCNA_02413	0.33	+0.9
2,557,381	-		CCNA_02413	0.33	+0.0
2,557,381	-		CCNA_02413	0.33	+0.3
2,557,381	-		CCNA_02413	0.33	-0.2
2,557,386	-		CCNA_02413	0.33	+1.7
2,557,401	-		CCNA_02413	0.34	+0.9
2,557,401	-		CCNA_02413	0.34	+0.7
2,557,420	-		CCNA_02413	0.36	+0.3
2,557,435	+		CCNA_02413	0.37	-1.7
2,557,463	+		CCNA_02413	0.40	+1.7
2,557,463	+		CCNA_02413	0.40	+0.4
2,557,463	+		CCNA_02413	0.40	-1.7
2,557,463	+		CCNA_02413	0.40	+0.7
2,557,470	-		CCNA_02413	0.40	+1.6
2,557,471	-				+1.7
2,557,471	-		CCNA_02413	0.40	+0.6
2,557,471	-		CCNA_02413	0.40	-1.0
2,557,538	+		CCNA_02413	0.46	-0.5
2,557,560	-		CCNA_02413	0.48	+1.3
2,557,589	+		CCNA_02413	0.51	-1.1
2,557,589	+		CCNA_02413	0.51	-0.3
2,557,589	+		CCNA_02413	0.51	+1.7
2,557,589	+		CCNA_02413	0.51	+1.1
2,557,589	+		CCNA_02413	0.51	-0.9
2,557,589	+		CCNA_02413	0.51	-1.8
2,557,589	+		CCNA_02413	0.51	+1.1
2,557,597	-		CCNA_02413	0.51	+0.7
2,557,597	-		CCNA_02413	0.51	-1.3
2,557,597	-		CCNA_02413	0.51	-1.0
2,557,597	-		CCNA_02413	0.51	+0.3
2,557,597	-		CCNA_02413	0.51	-0.7
2,557,597	-		CCNA_02413	0.51	+4.3
2,557,597	-		CCNA_02413	0.51	-0.3
2,557,597	-		CCNA_02413	0.51	+2.0
2,557,597	-		CCNA_02413	0.51	+1.4
2,557,614	-		CCNA_02413	0.53	-0.3
2,557,624	+		CCNA_02413	0.54	+0.4
2,557,631	+		CCNA_02413	0.54	-1.9
2,557,643	+		CCNA_02413	0.55	+1.7
2,557,720	+		CCNA_02413	0.62	-2.1
2,557,729	-		CCNA_02413	0.63	+2.7
2,557,729	-		CCNA_02413	0.63	+0.0
2,557,736	+		CCNA_02413	0.63	+0.7
2,557,757	-		CCNA_02413	0.65	-0.2
2,557,759	+		CCNA_02413	0.65	+1.1
2,557,759	+		CCNA_02413	0.65	+2.7
2,557,767	-		CCNA_02413	0.66	+0.7
2,557,767	-		CCNA_02413	0.66	-0.7
2,557,795	+		CCNA_02413	0.68	-2.4