Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02322

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,463,759	+		CCNA_02321	0.19	-0.5
2,463,767	-		CCNA_02321	0.20	-1.4
2,463,817	+		CCNA_02321	0.24	+1.1
2,463,825	-		CCNA_02321	0.24	+1.2
2,463,825	-		CCNA_02321	0.24	+1.0
2,463,839	-		CCNA_02321	0.26	-0.2
2,463,847	-		CCNA_02321	0.26	-1.5
2,463,868	-		CCNA_02321	0.28	-0.2
2,463,882	+		CCNA_02321	0.29	+0.9
2,463,919	+		CCNA_02321	0.32	+0.2
2,463,932	-		CCNA_02321	0.34	-1.4
2,463,937	-		CCNA_02321	0.34	-0.2
2,463,956	+		CCNA_02321	0.36	+2.7
2,463,956	-		CCNA_02321	0.36	+1.6
2,463,962	-		CCNA_02321	0.36	+0.6
2,463,975	+		CCNA_02321	0.37	+0.5
2,463,975	+		CCNA_02321	0.37	-2.0
2,463,999	-		CCNA_02321	0.39	+1.6
2,464,006	+		CCNA_02321	0.40	-1.2
2,464,070	+		CCNA_02321	0.45	+0.3
2,464,070	+		CCNA_02321	0.45	-0.2
2,464,071	+		CCNA_02321	0.45	-0.1
2,464,085	-		CCNA_02321	0.46	+1.0
2,464,091	+		CCNA_02321	0.47	+1.3
2,464,182	-		CCNA_02321	0.55	-1.5
2,464,182	-		CCNA_02321	0.55	-0.0
2,464,182	-		CCNA_02321	0.55	+0.8
2,464,186	+		CCNA_02321	0.55	+0.2
2,464,191	+		CCNA_02321	0.55	-0.1
2,464,196	+		CCNA_02321	0.56	-2.0
2,464,209	-		CCNA_02321	0.57	-1.2
2,464,228	+		CCNA_02321	0.58	+0.9
2,464,244	+		CCNA_02321	0.60	-0.9
2,464,353	-		CCNA_02321	0.69	+2.6
2,464,356	+		CCNA_02321	0.69	+0.2
2,464,356	+		CCNA_02321	0.69	-0.3
2,464,362	+		CCNA_02321	0.70	+2.0
2,464,370	-		CCNA_02321	0.70	-0.8
2,464,374	+		CCNA_02321	0.71	-0.4
2,464,377	-		CCNA_02321	0.71	-0.4
2,464,383	+		CCNA_02321	0.72	-0.6
2,464,409	+		CCNA_02321	0.74	+1.6
2,464,431	-		CCNA_02321	0.76	-0.9
2,464,472	+		CCNA_02321	0.79	-1.0
2,464,490	-		CCNA_02321	0.81	+1.1
2,464,506	-		CCNA_02321	0.82	-1.8
2,464,568	-		CCNA_02321	0.87	-1.2
2,464,612	+				+0.6
2,464,660	+				-1.9
2,464,668	-				-0.4
2,464,668	-				-0.2
2,464,668	-				-1.5
2,464,698	-				-0.7
2,464,715	+				-1.1
2,464,723	+				+0.2
2,464,773	+		CCNA_02322	0.16	-2.1
2,464,792	+		CCNA_02322	0.20	-0.9
2,464,847	-		CCNA_02322	0.32	-0.8
2,464,851	+		CCNA_02322	0.32	-1.4
2,464,872	-		CCNA_02322	0.37	-1.9
2,464,882	-		CCNA_02322	0.39	-0.0
2,464,916	-		CCNA_02322	0.46	-0.4
2,464,921	+		CCNA_02322	0.48	-0.1
2,464,943	-		CCNA_02322	0.52	+1.2
2,464,948	-		CCNA_02322	0.53	+1.8
2,464,998	-		CCNA_02322	0.64	+0.3
2,465,003	-		CCNA_02322	0.65	+1.3
2,465,012	+		CCNA_02322	0.67	-1.3
2,465,024	+		CCNA_02322	0.70	-0.1
2,465,024	+		CCNA_02322	0.70	+2.6
2,465,032	-		CCNA_02322	0.71	-0.2
2,465,032	-		CCNA_02322	0.71	-0.2
2,465,032	-		CCNA_02322	0.71	-0.9
2,465,032	-		CCNA_02322	0.71	+0.6
2,465,101	+		CCNA_02322	0.86	+3.0
2,465,142	-				-1.4
2,465,173	+				+0.2
2,465,198	+				+2.7
2,465,219	+				+1.8
2,465,219	+				+1.0
2,465,222	-				+2.2
2,465,227	-				-0.6
2,465,227	-				-2.3
2,465,227	-				-0.4
2,465,244	+				+1.1
2,465,252	-				-0.2
2,465,275	-				+0.3
2,465,302	-				+1.6
2,465,302	-		CCNA_03966	0.15	-2.6
2,465,324	+		CCNA_03966	0.20	+1.3
2,465,332	-		CCNA_03966	0.22	-1.0
2,465,332	-		CCNA_03966	0.22	-0.0
2,465,340	+		CCNA_03966	0.23	+1.2
2,465,346	+		CCNA_03966	0.25	+1.3
2,465,354	-		CCNA_03966	0.27	-1.9
2,465,403	+		CCNA_03966	0.38	+1.9
2,465,403	+		CCNA_03966	0.38	+1.4
2,465,411	-		CCNA_03966	0.40	+0.6
2,465,430	-		CCNA_03966	0.44	-0.6
2,465,470	-		CCNA_03966	0.53	-0.0
2,465,483	+		CCNA_03966	0.56	+2.0
2,465,491	-		CCNA_03966	0.58	-0.4
2,465,491	-		CCNA_03966	0.58	-2.0
2,465,492	+		CCNA_03966	0.58	+2.2
2,465,492	+		CCNA_03966	0.58	+1.8
2,465,605	+		CCNA_03966	0.84	+2.4
2,465,613	-		CCNA_03966	0.86	+0.6
2,465,689	-				-0.0
2,465,714	+				+1.3
2,465,717	-				-1.4
2,465,769	-				+1.5
2,465,803	-				+2.5
2,465,803	-				-0.6
2,465,942	+		CCNA_02324	0.13	+1.6
2,465,954	+		CCNA_02324	0.14	-0.6
2,465,962	-		CCNA_02324	0.15	+2.5
2,465,962	-		CCNA_02324	0.15	+4.0
2,465,999	+		CCNA_02324	0.19	-0.6
2,465,999	+		CCNA_02324	0.19	-0.3
2,466,025	+		CCNA_02324	0.22	-0.2
2,466,025	+		CCNA_02324	0.22	+0.8
2,466,090	-		CCNA_02324	0.29	+3.1