Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02295
Experiment: PYE with nitrite 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | PYE with nitrite 5 mM |
---|---|---|---|---|---|
remove | |||||
2,442,561 | + | +1.7 | |||
2,442,574 | - | -0.5 | |||
2,442,674 | - | CCNA_02295 | 0.40 | -1.0 | |
2,442,698 | - | CCNA_02295 | 0.47 | +0.9 | |
2,442,705 | + | CCNA_02295 | 0.50 | +0.7 | |
2,442,711 | + | CCNA_02295 | 0.51 | +0.5 | |
2,442,715 | + | CCNA_02295 | 0.53 | +0.6 | |
2,442,719 | - | CCNA_02295 | 0.54 | -0.7 | |
2,442,719 | - | CCNA_02295 | 0.54 | +0.9 | |
2,442,795 | + | CCNA_02295 | 0.78 | +1.2 | |
2,442,800 | + | CCNA_02295 | 0.79 | +0.1 | |
2,443,582 | + | CCNA_02296 | 0.56 | +0.1 | |
2,443,715 | + | CCNA_02296 | 0.66 | +2.5 |
Or see this region's nucleotide sequence