Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02263

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,416,362	-		CCNA_02262	0.75	-1.4
2,416,459	+		CCNA_02262	0.77	-1.0
2,416,460	+		CCNA_02262	0.77	+0.8
2,416,472	-		CCNA_02262	0.77	-1.0
2,416,494	+		CCNA_02262	0.78	+2.4
2,416,494	+		CCNA_02262	0.78	-1.9
2,416,494	+		CCNA_02262	0.78	+0.4
2,416,502	-		CCNA_02262	0.78	+1.4
2,416,502	-		CCNA_02262	0.78	-1.2
2,416,503	-		CCNA_02262	0.78	+1.4
2,416,530	-		CCNA_02262	0.79	+0.1
2,416,530	-		CCNA_02262	0.79	+0.8
2,416,537	+		CCNA_02262	0.79	+0.4
2,416,537	+		CCNA_02262	0.79	+1.4
2,416,545	-		CCNA_02262	0.79	-0.2
2,416,575	+		CCNA_02262	0.80	-0.9
2,416,583	-		CCNA_02262	0.80	+0.8
2,416,583	-		CCNA_02262	0.80	+0.4
2,416,583	-		CCNA_02262	0.80	+0.3
2,416,583	-		CCNA_02262	0.80	-0.6
2,416,583	-		CCNA_02262	0.80	+2.4
2,416,583	-		CCNA_02262	0.80	+0.4
2,416,608	+		CCNA_02262	0.81	-0.4
2,416,617	+		CCNA_02262	0.81	-1.9
2,416,630	+		CCNA_02262	0.81	+0.4
2,416,635	+		CCNA_02262	0.81	-1.7
2,416,648	+		CCNA_02262	0.82	+2.4
2,416,684	+		CCNA_02262	0.83	-0.9
2,416,684	+		CCNA_02262	0.83	-1.3
2,416,692	-		CCNA_02262	0.83	-1.4
2,416,738	-		CCNA_02262	0.84	-1.0
2,416,745	-		CCNA_02262	0.84	-0.9
2,416,768	+		CCNA_02262	0.85	-1.0
2,416,772	+		CCNA_02262	0.85	+0.8
2,416,776	-		CCNA_02262	0.85	+1.2
2,416,776	-		CCNA_02262	0.85	+2.6
2,416,776	-		CCNA_02262	0.85	+0.7
2,416,776	-		CCNA_02262	0.85	+0.1
2,416,776	-		CCNA_02262	0.85	+1.5
2,416,782	+		CCNA_02262	0.85	+0.8
2,416,819	+		CCNA_02262	0.86	+0.8
2,416,827	-		CCNA_02262	0.86	-1.4
2,416,832	-		CCNA_02262	0.87	+0.5
2,416,899	+		CCNA_02262	0.88	-1.0
2,416,901	-		CCNA_02262	0.88	+0.8
2,416,901	-		CCNA_02262	0.88	+0.8
2,416,909	-		CCNA_02262	0.88	-2.3
2,416,909	-		CCNA_02262	0.88	+0.6
2,416,958	+		CCNA_02262	0.90	+1.4
2,416,970	+				+0.4
2,416,978	-				-0.2
2,417,002	-				-0.6
2,417,018	+				+0.1
2,417,026	-				-0.6
2,417,065	-				-2.3
2,417,070	-				+0.4
2,417,082	-				+0.4
2,417,100	-				-1.7
2,417,126	+				+0.5
2,417,127	-				-0.4
2,417,164	-				+0.1
2,417,185	+				+2.0
2,417,185	+				-0.0
2,417,185	+				-0.4
2,417,186	-				-1.7
2,417,193	-				-2.0
2,417,193	-				-1.5
2,417,193	-				+0.4
2,417,193	-				-0.2
2,417,235	+				+1.0
2,417,235	+				-1.0
2,417,243	-				+0.4
2,417,243	-				-1.3
2,417,243	-				+1.2
2,417,243	-				-1.3
2,417,243	-				-0.2
2,417,288	-				+0.1
2,417,297	+				-0.7
2,417,305	+				-0.4
2,417,317	+				-0.9
2,417,337	-				-1.5
2,417,365	+				-1.0
2,417,365	+				-0.2
2,417,385	+				-0.6
2,417,385	+				+0.4
2,417,385	+				+0.6
2,417,386	+				-0.1
2,417,390	+				-1.7
2,417,393	-				+0.8
2,417,393	-				-1.5
2,417,427	-		CCNA_02263	0.15	+0.8
2,417,448	+		CCNA_02263	0.19	-1.4
2,417,472	-		CCNA_02263	0.24	+0.4
2,417,478	-		CCNA_02263	0.25	+0.2
2,417,532	+		CCNA_02263	0.36	+0.1
2,417,535	-		CCNA_02263	0.37	+1.8
2,417,540	-		CCNA_02263	0.38	-2.0
2,417,540	-		CCNA_02263	0.38	-0.5
2,417,540	-		CCNA_02263	0.38	+0.1
2,417,540	-		CCNA_02263	0.38	-1.5
2,417,555	+		CCNA_02263	0.41	+0.8
2,417,558	-		CCNA_02263	0.41	+0.1
2,417,608	-		CCNA_02263	0.51	-0.6
2,417,631	+		CCNA_02263	0.56	-1.0
2,417,631	+		CCNA_02263	0.56	-1.7
2,417,634	-		CCNA_02263	0.57	-1.3
2,417,639	-		CCNA_02263	0.58	-0.9
2,417,639	-		CCNA_02263	0.58	+0.8
2,417,669	-		CCNA_02263	0.64	-1.0
2,417,799	+				-1.4
2,417,799	+				+0.4
2,417,807	-				+0.8
2,417,807	-				-1.5
2,417,807	-				+0.4
2,417,807	-				-1.2
2,417,809	+				-0.5
2,417,809	+				-0.2
2,417,809	+				-1.2
2,417,817	-				+0.8
2,417,868	+				-2.9
2,417,868	+				+0.1
2,417,868	+				-1.2
2,417,869	-				+1.4
2,417,876	-				-3.4
2,417,876	-				+0.8
2,417,877	+				-0.6
2,417,887	+				+1.4
2,417,905	-				+1.4
2,417,988	-				+1.4
2,418,053	+				-1.0
2,418,061	-				+2.4
2,418,140	+		CCNA_02264	0.20	-1.9
2,418,140	-		CCNA_02264	0.20	+0.1
2,418,182	+		CCNA_02264	0.27	+0.9
2,418,189	-		CCNA_02264	0.28	+0.9
2,418,205	+		CCNA_02264	0.31	-0.3
2,418,255	-		CCNA_02264	0.40	-1.9
2,418,290	-		CCNA_02264	0.46	+0.9
2,418,317	-		CCNA_02264	0.51	-1.0
2,418,320	+		CCNA_02264	0.51	-2.6
2,418,322	-		CCNA_02264	0.52	-0.7
2,418,325	+		CCNA_02264	0.52	+0.0
2,418,338	-		CCNA_02264	0.54	-1.3
2,418,352	+		CCNA_02264	0.57	-1.1
2,418,373	+		CCNA_02264	0.60	+1.4
2,418,415	+		CCNA_02264	0.68	+0.1
2,418,423	-		CCNA_02264	0.69	-0.7
2,418,423	-		CCNA_02264	0.69	+0.2
2,418,513	+		CCNA_02264	0.85	+1.9
2,418,529	+		CCNA_02264	0.88	-0.4
2,418,535	+		CCNA_02264	0.89	+0.4
2,418,535	+		CCNA_02264	0.89	-0.3
2,418,543	-				-2.1
2,418,598	+				+2.4
2,418,604	-				-1.9
2,418,636	+				-2.4
2,418,684	+				-1.1
2,418,684	+				-0.3
2,418,684	+				+0.1
2,418,684	+				-2.2
2,418,692	-				+0.5
2,418,692	-				-1.2
2,418,692	-				-0.1
2,418,692	-				-0.1
2,418,761	+		CCNA_02265	0.23	+0.8
2,418,774	-		CCNA_02265	0.25	+0.5
2,418,805	-		CCNA_02265	0.32	-0.9