Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02248

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,396,091	+				+1.5
2,396,091	+				-0.3
2,396,137	-				-0.9
2,396,162	-				+0.1
2,396,179	-				-0.5
2,396,202	-				-0.7
2,397,073	-				-0.2
2,397,073	-				-0.2
2,397,106	+		CCNA_02248	0.37	-2.5
2,397,191	+				-1.9
2,397,306	-		CCNA_02249	0.17	+1.2
2,397,311	-		CCNA_02249	0.19	+0.1
2,397,400	-		CCNA_02249	0.41	+1.8
2,397,476	-		CCNA_02249	0.60	+0.1
2,397,512	-		CCNA_02249	0.69	+2.3
2,397,513	-		CCNA_02249	0.69	-0.3
2,397,543	+		CCNA_02249	0.77	-0.4
2,397,584	-		CCNA_02249	0.87	+1.7
2,397,584	-		CCNA_02249	0.87	+1.0
2,397,614	+				-1.2
2,397,637	-				-0.1
2,397,646	-				+3.0
2,397,646	-				+1.4
2,397,659	+				-3.3
2,397,697	-				+1.4
2,397,763	+				+0.3
2,397,763	+				+1.1
2,397,771	-				+1.9
2,397,776	-				+1.7
2,397,839	+				-1.0
2,397,841	+				+1.5
2,397,865	-				+1.5
2,397,875	-				+0.9
2,398,020	-				+0.9
2,398,154	-		CCNA_02250	0.16	+1.5