Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02226

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,373,734	-				+3.2
2,373,734	-				+2.4
2,373,787	+		CCNA_02225	0.11	-0.9
2,373,818	+		CCNA_02225	0.14	+0.5
2,373,856	-		CCNA_02225	0.18	+2.4
2,373,944	-		CCNA_02225	0.27	+2.3
2,373,971	+		CCNA_02225	0.30	+0.5
2,373,995	-		CCNA_02225	0.32	+2.6
2,374,100	-		CCNA_02225	0.43	+5.1
2,374,122	-		CCNA_02225	0.45	+3.3
2,374,249	+		CCNA_02225	0.58	+0.9
2,374,257	-		CCNA_02225	0.59	+3.2
2,374,299	+		CCNA_02225	0.63	+3.5
2,374,307	-		CCNA_02225	0.64	+2.9
2,374,317	+		CCNA_02225	0.65	-0.5
2,374,324	-		CCNA_02225	0.66	+3.5
2,374,353	+		CCNA_02225	0.69	+1.5
2,374,458	-		CCNA_02225	0.80	+3.3
2,374,458	-		CCNA_02225	0.80	+4.0
2,374,458	-		CCNA_02225	0.80	+3.9
2,374,458	-		CCNA_02225	0.80	+4.6
2,374,499	-		CCNA_02225	0.84	+4.2
2,374,539	-		CCNA_02225	0.88	+3.6
2,374,558	-		CCNA_02225	0.90	+3.9
2,374,738	-				-0.1
2,374,741	+		CCNA_02226	0.11	+0.9
2,374,768	-		CCNA_02226	0.18	-1.9
2,374,768	-		CCNA_02226	0.18	-0.3
2,374,818	-		CCNA_02226	0.31	-1.1
2,374,831	+		CCNA_02226	0.34	+0.5
2,374,831	+		CCNA_02226	0.34	-0.3
2,374,839	-		CCNA_02226	0.37	-0.1
2,374,839	-		CCNA_02226	0.37	+0.7
2,374,844	-		CCNA_02226	0.38	-2.1
2,374,862	-		CCNA_02226	0.43	+0.9
2,374,902	+		CCNA_02226	0.53	+2.5
2,374,902	+		CCNA_02226	0.53	-1.4
2,374,910	-		CCNA_02226	0.55	-2.4
2,374,942	-		CCNA_02226	0.64	-0.7
2,374,945	+		CCNA_02226	0.65	-0.9
2,374,948	-		CCNA_02226	0.65	+0.3
2,374,977	+		CCNA_02226	0.73	-2.1
2,375,000	-		CCNA_02226	0.79	-1.1
2,375,003	+		CCNA_02226	0.80	+0.2
2,375,013	+		CCNA_02226	0.83	-1.0
2,375,021	-		CCNA_02226	0.85	+0.2
2,375,023	+		CCNA_02226	0.85	-1.0
2,375,023	+		CCNA_02226	0.85	-2.2
2,375,031	-		CCNA_02226	0.87	+0.2
2,375,031	-		CCNA_02226	0.87	+0.9
2,375,031	-		CCNA_02226	0.87	+1.5
2,375,031	-		CCNA_02226	0.87	-1.3
2,375,043	+				+1.5
2,375,043	+				-1.0
2,375,051	-				+0.5
2,375,061	+				+0.5
2,375,068	+				+1.5
2,375,069	-				-1.0
2,375,076	-				-1.0
2,375,076	-				-1.7
2,375,095	-				-0.6
2,375,095	-				-0.8
2,375,095	-				-1.8
2,375,101	+				+0.5
2,375,149	-				-0.4
2,375,194	-				+0.1
2,375,225	+		CCNA_02227	0.13	-1.6
2,375,256	-		CCNA_02227	0.17	+1.3
2,375,307	+		CCNA_02227	0.23	+0.9
2,375,315	-		CCNA_02227	0.23	+1.5
2,375,329	-		CCNA_02227	0.25	+1.0
2,375,380	+		CCNA_02227	0.31	+0.1
2,375,407	-		CCNA_02227	0.34	+0.7
2,375,430	+		CCNA_02227	0.37	-1.6
2,375,438	-		CCNA_02227	0.38	-0.6
2,375,444	+		CCNA_02227	0.38	+1.5
2,375,444	+		CCNA_02227	0.38	+0.5
2,375,452	-		CCNA_02227	0.39	+0.2
2,375,468	+		CCNA_02227	0.41	+0.5
2,375,475	-		CCNA_02227	0.42	+0.6
2,375,496	-		CCNA_02227	0.44	+1.4
2,375,497	-		CCNA_02227	0.44	+0.9
2,375,518	+		CCNA_02227	0.47	+1.5
2,375,526	-		CCNA_02227	0.48	+0.3
2,375,527	-		CCNA_02227	0.48	-0.9
2,375,537	-		CCNA_02227	0.49	-1.2
2,375,537	-		CCNA_02227	0.49	+0.1
2,375,612	+		CCNA_02227	0.58	-0.4
2,375,612	+		CCNA_02227	0.58	+0.5
2,375,661	+		CCNA_02227	0.63	+0.5
2,375,663	+		CCNA_02227	0.63	-1.3
2,375,688	-		CCNA_02227	0.66	+1.2
2,375,703	+		CCNA_02227	0.68	-0.5
2,375,703	+		CCNA_02227	0.68	-0.3
2,375,711	-		CCNA_02227	0.69	+0.7
2,375,771	-		CCNA_02227	0.76	-0.2
2,375,784	+		CCNA_02227	0.77	-0.9
2,375,789	+		CCNA_02227	0.78	+0.9
2,375,797	-		CCNA_02227	0.79	-0.0
2,375,797	-		CCNA_02227	0.79	-0.6
2,375,820	-		CCNA_02227	0.81	+0.0
2,375,825	-		CCNA_02227	0.82	+0.9
2,375,825	-		CCNA_02227	0.82	+0.1
2,375,837	+		CCNA_02227	0.83	+1.5
2,375,847	+		CCNA_02227	0.84	+0.1
2,375,889	-		CCNA_02227	0.89	-1.0
2,375,889	-		CCNA_02227	0.89	+0.7
2,375,889	-		CCNA_02227	0.89	+0.5
2,375,917	+				-0.7
2,375,925	-				-0.4
2,376,038	+				+0.1
2,376,046	-				+0.9