Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02212

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,358,794	-		CCNA_02211	0.21	-0.1
2,358,833	+		CCNA_02211	0.24	-0.0
2,358,868	+		CCNA_02211	0.27	-1.6
2,358,870	-		CCNA_02211	0.27	+1.4
2,358,936	+		CCNA_02211	0.33	-0.9
2,358,943	+		CCNA_02211	0.34	-0.6
2,358,982	+		CCNA_02211	0.37	-0.7
2,359,014	-		CCNA_02211	0.40	-0.9
2,359,029	+		CCNA_02211	0.41	-1.0
2,359,084	+		CCNA_02211	0.46	+2.4
2,359,114	-		CCNA_02211	0.49	-0.9
2,359,126	+		CCNA_02211	0.50	-2.0
2,359,143	+		CCNA_02211	0.51	-0.6
2,359,143	+		CCNA_02211	0.51	+0.8
2,359,145	-		CCNA_02211	0.52	-0.6
2,359,161	+		CCNA_02211	0.53	-0.7
2,359,174	+		CCNA_02211	0.54	-0.4
2,359,200	+		CCNA_02211	0.56	-0.9
2,359,438	+		CCNA_02211	0.77	-0.4
2,359,468	+		CCNA_02211	0.80	+1.2
2,359,491	-		CCNA_02211	0.82	+1.4
2,359,512	-		CCNA_02211	0.84	-2.8
2,359,520	+		CCNA_02211	0.84	-1.3
2,359,540	+		CCNA_02211	0.86	-0.7
2,359,555	+		CCNA_02211	0.87	-0.1
2,359,555	+		CCNA_02211	0.87	-1.0
2,359,555	+		CCNA_02211	0.87	+0.4
2,359,572	+		CCNA_02211	0.89	-2.5
2,359,572	+		CCNA_02211	0.89	-0.4
2,359,572	+		CCNA_02211	0.89	-1.6
2,359,572	+		CCNA_02211	0.89	-0.2
2,359,575	-		CCNA_02211	0.89	-0.5
2,359,580	-		CCNA_02211	0.90	+0.4
2,359,580	-		CCNA_02211	0.90	-1.9
2,359,580	-		CCNA_02211	0.90	-2.0
2,359,580	-		CCNA_02211	0.90	+0.3
2,359,580	-		CCNA_02211	0.90	+0.9
2,359,621	+				+0.9
2,359,634	-				-0.4
2,359,635	+				+0.9
2,359,679	+				+1.0
2,359,692	-				-1.0
2,359,752	+				+1.1
2,359,893	+		CCNA_02212	0.12	+0.1
2,359,902	+		CCNA_02212	0.13	+0.9
2,359,902	+		CCNA_02212	0.13	-1.6
2,359,972	+		CCNA_02212	0.21	+0.6
2,360,063	+		CCNA_02212	0.31	+0.1
2,360,069	-		CCNA_02212	0.32	-1.4
2,360,104	+		CCNA_02212	0.35	+2.4
2,360,104	+		CCNA_02212	0.35	-0.4
2,360,104	+		CCNA_02212	0.35	-1.4
2,360,112	-		CCNA_02212	0.36	+0.1
2,360,155	-		CCNA_02212	0.41	+0.0
2,360,174	+		CCNA_02212	0.43	-0.6
2,360,180	-		CCNA_02212	0.44	-1.0
2,360,181	+		CCNA_02212	0.44	-0.4
2,360,186	+		CCNA_02212	0.44	+0.9
2,360,232	+		CCNA_02212	0.49	-0.4
2,360,240	-		CCNA_02212	0.50	-2.1
2,360,255	+		CCNA_02212	0.52	-0.4
2,360,303	-		CCNA_02212	0.57	+0.9
2,360,322	-		CCNA_02212	0.59	-2.1
2,360,333	+		CCNA_02212	0.61	+0.1
2,360,341	-		CCNA_02212	0.61	-0.7
2,360,361	-		CCNA_02212	0.64	+0.1
2,360,361	-		CCNA_02212	0.64	-0.9
2,360,369	-		CCNA_02212	0.64	-1.4
2,360,407	-		CCNA_02212	0.69	-2.3
2,360,439	+		CCNA_02212	0.72	-0.6
2,360,472	-		CCNA_02212	0.76	-0.1
2,360,473	-		CCNA_02212	0.76	-1.4
2,360,490	-		CCNA_02212	0.78	-2.4
2,360,490	-		CCNA_02212	0.78	-2.8
2,360,540	+		CCNA_02212	0.83	-0.7
2,360,545	+		CCNA_02212	0.84	+0.0
2,360,553	-		CCNA_02212	0.85	-1.4
2,360,609	+				+0.3
2,360,617	-				+1.1
2,360,617	-				+1.0
2,360,669	-				-1.0
2,360,669	-				-1.5
2,360,705	-				-0.3
2,360,717	+				-0.0
2,360,722	+				-0.4
2,360,863	+				+1.4
2,360,872	+		CCNA_02213	0.11	+0.3
2,360,931	+		CCNA_02213	0.16	+0.4
2,360,950	+		CCNA_02213	0.18	-1.3
2,360,986	-		CCNA_02213	0.21	+0.2
2,360,996	-		CCNA_02213	0.22	+1.1
2,361,001	+		CCNA_02213	0.22	-1.4
2,361,036	-		CCNA_02213	0.26	-0.1
2,361,089	-		CCNA_02213	0.30	+0.9
2,361,094	+		CCNA_02213	0.31	-0.7
2,361,150	-		CCNA_02213	0.36	-0.1
2,361,160	-		CCNA_02213	0.37	+1.6
2,361,168	-		CCNA_02213	0.38	+0.1
2,361,207	+		CCNA_02213	0.41	-0.1
2,361,341	+		CCNA_02213	0.53	+0.1
2,361,356	+				+2.4
2,361,364	-		CCNA_02213	0.56	+2.7
2,361,380	-				+2.4
2,361,416	-		CCNA_02213	0.60	+0.4
2,361,416	-		CCNA_02213	0.60	-1.3
2,361,416	-		CCNA_02213	0.60	-0.1
2,361,416	-		CCNA_02213	0.60	-0.7
2,361,416	-		CCNA_02213	0.60	+0.9
2,361,459	-		CCNA_02213	0.64	+0.4
2,361,477	-		CCNA_02213	0.66	-2.9
2,361,477	-		CCNA_02213	0.66	-1.0
2,361,477	-		CCNA_02213	0.66	-1.9
2,361,477	-		CCNA_02213	0.66	-0.0
2,361,477	-		CCNA_02213	0.66	-1.2
2,361,479	+		CCNA_02213	0.66	-0.4
2,361,496	+		CCNA_02213	0.68	-2.4
2,361,496	+		CCNA_02213	0.68	+0.1
2,361,504	-		CCNA_02213	0.68	+0.6
2,361,511	+		CCNA_02213	0.69	+0.7
2,361,511	+		CCNA_02213	0.69	-2.2
2,361,511	+		CCNA_02213	0.69	-1.4
2,361,511	+		CCNA_02213	0.69	+0.4
2,361,511	+		CCNA_02213	0.69	-0.9
2,361,519	-		CCNA_02213	0.70	-0.5
2,361,519	-		CCNA_02213	0.70	-1.9
2,361,519	-		CCNA_02213	0.70	-1.6
2,361,519	-		CCNA_02213	0.70	+1.6
2,361,519	-		CCNA_02213	0.70	-0.1
2,361,535	+		CCNA_02213	0.71	+0.9
2,361,543	-		CCNA_02213	0.72	+0.2