Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02116

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,264,728	+		CCNA_02115	0.47	-2.4
2,264,731	-		CCNA_02115	0.47	-1.0
2,264,731	-		CCNA_02115	0.47	-0.3
2,264,736	-		CCNA_02115	0.47	-0.7
2,264,768	-		CCNA_02115	0.49	+0.9
2,264,880	-		CCNA_02115	0.56	+1.5
2,264,945	+		CCNA_02115	0.60	-0.8
2,264,975	-		CCNA_02115	0.62	-1.0
2,264,982	-		CCNA_02115	0.62	-0.7
2,264,982	-		CCNA_02115	0.62	-0.3
2,264,982	-		CCNA_02115	0.62	+1.5
2,264,992	-		CCNA_02115	0.63	+1.8
2,265,001	-		CCNA_02115	0.63	-1.4
2,265,001	-		CCNA_02115	0.63	+0.5
2,265,031	+		CCNA_02115	0.65	+0.5
2,265,052	+		CCNA_02115	0.66	+2.5
2,265,071	+		CCNA_02115	0.68	+2.5
2,265,134	+		CCNA_02115	0.71	-2.0
2,265,134	+		CCNA_02115	0.71	-1.8
2,265,134	-		CCNA_02115	0.71	+0.6
2,265,201	+		CCNA_02115	0.75	+0.2
2,265,201	+		CCNA_02115	0.75	+0.2
2,265,209	-		CCNA_02115	0.76	-0.5
2,265,243	+		CCNA_02115	0.78	-0.8
2,265,254	+		CCNA_02115	0.79	-0.3
2,265,254	+		CCNA_02115	0.79	+2.5
2,265,299	+		CCNA_02115	0.81	+0.2
2,265,307	-		CCNA_02115	0.82	+2.5
2,265,321	+		CCNA_02115	0.83	-0.3
2,265,328	-		CCNA_02115	0.83	+0.2
2,265,329	-		CCNA_02115	0.83	-1.4
2,265,332	+		CCNA_02115	0.84	-1.5
2,265,337	+		CCNA_02115	0.84	+1.5
2,265,337	+		CCNA_02115	0.84	+1.1
2,265,337	+		CCNA_02115	0.84	+1.5
2,265,345	-		CCNA_02115	0.84	+0.9
2,265,378	+		CCNA_02115	0.86	-1.2
2,265,472	+				+0.5
2,265,480	-				+2.5
2,265,557	-				-1.3
2,265,632	-				+0.5
2,265,708	+				-1.9
2,265,715	-				+0.9
2,265,726	+				-1.4
2,265,732	-				-0.1
2,265,739	+				-0.5
2,265,739	+				-0.5
2,265,741	+				-0.3
2,265,747	-				+0.9
2,265,753	+				+0.2
2,265,761	-				+0.2
2,265,855	+		CCNA_02116	0.16	-0.5
2,265,867	+		CCNA_02116	0.17	-0.3
2,265,892	-		CCNA_02116	0.21	-0.5
2,265,892	-		CCNA_02116	0.21	-2.0
2,265,922	-		CCNA_02116	0.24	+2.5
2,265,972	-		CCNA_02116	0.31	+1.7
2,265,976	-		CCNA_02116	0.31	-1.6
2,266,010	+		CCNA_02116	0.35	+0.2
2,266,018	-		CCNA_02116	0.36	-1.2
2,266,032	-		CCNA_02116	0.38	+0.2
2,266,032	-		CCNA_02116	0.38	-1.0
2,266,032	-		CCNA_02116	0.38	-0.4
2,266,041	-		CCNA_02116	0.39	+0.9
2,266,079	-		CCNA_02116	0.44	+0.5
2,266,084	-		CCNA_02116	0.45	-1.4
2,266,143	+		CCNA_02116	0.52	-0.3
2,266,151	-		CCNA_02116	0.53	-1.2
2,266,151	-		CCNA_02116	0.53	-1.0
2,266,151	-		CCNA_02116	0.53	-1.4
2,266,151	-		CCNA_02116	0.53	-2.3
2,266,166	-		CCNA_02116	0.55	+0.0
2,266,266	-		CCNA_02116	0.67	+0.2
2,266,344	+		CCNA_02116	0.77	+2.5
2,266,348	+		CCNA_02116	0.78	-0.3
2,266,352	-		CCNA_02116	0.78	-0.4
2,266,382	-		CCNA_02116	0.82	-0.7
2,266,388	-		CCNA_02116	0.83	+3.5
2,266,430	+		CCNA_02116	0.88	-1.2
2,266,711	-		CCNA_02117	0.12	+0.9
2,266,717	+		CCNA_02117	0.13	-1.0
2,266,720	-		CCNA_02117	0.13	-1.0
2,266,725	-		CCNA_02117	0.14	-1.1
2,266,790	-		CCNA_02117	0.25	+0.3
2,266,847	+		CCNA_02117	0.35	+0.2
2,266,847	+		CCNA_02117	0.35	-1.8
2,266,855	-		CCNA_02117	0.36	-2.0
2,266,910	+		CCNA_02117	0.45	+0.2
2,266,934	+				+2.5
2,266,942	-		CCNA_02117	0.51	-0.7
2,267,027	-		CCNA_02117	0.65	-0.3
2,267,111	-		CCNA_02117	0.79	+0.5
2,267,113	+		CCNA_02117	0.79	+0.9
2,267,130	+		CCNA_02117	0.82	+1.5
2,267,130	+		CCNA_02117	0.82	-2.8
2,267,130	+		CCNA_02117	0.82	-0.1
2,267,138	-		CCNA_02117	0.83	-1.7
2,267,138	-		CCNA_02117	0.83	-1.4
2,267,138	-		CCNA_02117	0.83	-0.3
2,267,149	+		CCNA_02117	0.85	-1.7
2,267,157	-		CCNA_02117	0.87	+0.0
2,267,157	-		CCNA_02117	0.87	-0.4
2,267,162	+		CCNA_02117	0.87	+0.9
2,267,163	+		CCNA_02117	0.88	-2.7
2,267,164	-		CCNA_02117	0.88	-0.1
2,267,165	-		CCNA_02117	0.88	+0.2
2,267,165	-		CCNA_02117	0.88	-2.8
2,267,170	-		CCNA_02117	0.89	-1.7
2,267,206	-				-0.2
2,267,236	-				-0.8
2,267,324	-				+0.7
2,267,381	+				+0.5
2,267,522	+				-0.1