Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02114

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,262,339	+		CCNA_02112	0.80	-0.9
2,262,356	+		CCNA_02112	0.82	+0.2
2,262,364	-		CCNA_02112	0.82	-3.4
2,262,394	-		CCNA_02112	0.85	-1.4
2,262,410	+		CCNA_02112	0.87	+0.2
2,262,457	-				-0.3
2,262,462	-				-1.0
2,262,472	-				+1.5
2,262,487	-				+1.1
2,262,502	-				-0.1
2,262,516	-				-0.5
2,262,533	+				-2.4
2,262,563	-				+0.2
2,262,567	-				-0.3
2,262,618	-		CCNA_02113	0.10	+2.3
2,262,639	+		CCNA_02113	0.13	-0.9
2,262,678	+		CCNA_02113	0.19	-0.2
2,262,679	+		CCNA_02113	0.19	+1.8
2,262,707	+		CCNA_02113	0.23	-0.0
2,262,754	+		CCNA_02113	0.30	+0.7
2,262,769	+		CCNA_02113	0.33	+0.5
2,262,770	-		CCNA_02113	0.33	+0.9
2,262,799	+		CCNA_02113	0.37	-0.3
2,262,799	+		CCNA_02113	0.37	-1.1
2,262,799	+		CCNA_02113	0.37	-0.8
2,262,799	+		CCNA_02113	0.37	-0.8
2,262,801	+		CCNA_02113	0.37	-1.8
2,262,807	-		CCNA_02113	0.38	+0.2
2,262,807	-		CCNA_02113	0.38	+0.2
2,262,807	-		CCNA_02113	0.38	-0.3
2,262,807	-		CCNA_02113	0.38	-0.3
2,262,807	-		CCNA_02113	0.38	+1.2
2,262,822	+		CCNA_02113	0.41	+0.9
2,262,822	+		CCNA_02113	0.41	+0.1
2,262,822	+		CCNA_02113	0.41	-1.2
2,262,822	+		CCNA_02113	0.41	-1.3
2,262,822	+		CCNA_02113	0.41	-1.4
2,262,822	+		CCNA_02113	0.41	-1.5
2,262,822	+		CCNA_02113	0.41	-1.0
2,262,822	+		CCNA_02113	0.41	+0.2
2,262,830	-		CCNA_02113	0.42	+1.5
2,262,830	-		CCNA_02113	0.42	+2.5
2,262,830	-		CCNA_02113	0.42	-1.4
2,262,847	+		CCNA_02113	0.44	-0.5
2,262,988	+		CCNA_02113	0.65	-1.8
2,262,994	+		CCNA_02113	0.66	+0.0
2,263,051	-		CCNA_02113	0.75	+0.5
2,263,087	-		CCNA_02113	0.80	+0.2
2,263,172	+				+0.2
2,263,202	-				+0.2
2,263,222	+				-0.3
2,263,236	+				-0.8
2,263,236	+				+1.3
2,263,237	+				-2.1
2,263,237	+				-0.5
2,263,244	-				-0.1
2,263,244	-				-0.1
2,263,247	+				-0.3
2,263,255	-				+0.9
2,263,309	-				-1.1
2,263,309	-				-1.2
2,263,314	+				-0.5
2,263,324	-				-0.3
2,263,349	+				+1.5
2,263,423	+		CCNA_02114	0.49	-2.1
2,263,423	+		CCNA_02114	0.49	-1.1
2,263,431	-		CCNA_02114	0.54	+0.2
2,263,500	+				-1.1
2,263,517	+				+0.5
2,263,524	+				-2.1
2,263,525	-				+2.5
2,263,538	+				-0.1
2,263,541	-				-0.1
2,263,593	-				-0.7
2,263,645	+				-0.6
2,263,653	+				-1.3
2,263,666	-				-0.3
2,263,749	+				-2.5
2,263,749	+				-1.8
2,263,749	+				-1.8
2,263,749	+				-0.7
2,263,749	+				+0.2
2,263,757	-				+2.1
2,263,757	-				-0.0
2,263,757	-				-1.0
2,263,757	-				-1.4
2,263,769	-				-0.3
2,263,780	+				-1.7
2,263,903	+				-1.0
2,263,944	+				+0.5
2,263,962	-				-2.0
2,263,992	-				+0.2
2,264,159	-		CCNA_02115	0.12	-0.5
2,264,178	+		CCNA_02115	0.13	-0.8
2,264,223	+		CCNA_02115	0.16	-0.8
2,264,253	-		CCNA_02115	0.17	-0.5
2,264,277	+		CCNA_02115	0.19	-0.1
2,264,403	+		CCNA_02115	0.27	-0.7
2,264,446	-		CCNA_02115	0.29	-0.8