Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02057

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,205,163	+		CCNA_02055	0.31	-1.5
2,205,191	-		CCNA_02055	0.40	+0.2
2,205,193	+		CCNA_02055	0.41	+1.0
2,205,201	-		CCNA_02055	0.43	+0.4
2,205,203	-		CCNA_02055	0.44	-1.7
2,205,203	-		CCNA_02055	0.44	-0.7
2,205,203	-		CCNA_02055	0.44	+1.6
2,205,203	-		CCNA_02055	0.44	+0.9
2,205,229	+		CCNA_02055	0.52	+0.3
2,205,237	-		CCNA_02055	0.54	-1.4
2,205,259	-		CCNA_02055	0.61	-0.1
2,205,291	+		CCNA_02055	0.71	-0.4
2,205,306	-		CCNA_02055	0.75	+0.3
2,205,306	-		CCNA_02055	0.75	-0.4
2,205,310	-		CCNA_02055	0.76	-1.6
2,205,312	+		CCNA_02055	0.77	+1.0
2,205,316	-		CCNA_02055	0.78	-0.2
2,205,371	-				-0.3
2,205,371	-				+1.0
2,205,381	+				-0.2
2,206,071	+				+1.0
2,206,077	+				-0.0
2,206,161	+				-1.9
2,206,191	-				+0.3
2,206,223	-				-0.0
2,206,248	+				+0.6
2,206,248	+				+3.6
2,206,248	+				-1.4
2,206,256	-				-0.4
2,206,316	+		CCNA_02057	0.11	-0.9
2,206,329	-		CCNA_02057	0.11	-0.0
2,206,351	+		CCNA_02057	0.13	-0.5
2,206,365	+		CCNA_02057	0.14	+1.0
2,206,387	+		CCNA_02057	0.15	-1.3
2,206,434	-		CCNA_02057	0.19	-0.2
2,206,477	-		CCNA_02057	0.22	-1.2
2,206,481	+		CCNA_02057	0.22	+0.8
2,206,534	+		CCNA_02057	0.26	-1.7
2,206,557	+		CCNA_02057	0.27	+0.3
2,206,579	+		CCNA_02057	0.29	+0.6
2,206,579	+		CCNA_02057	0.29	-1.5
2,206,579	+		CCNA_02057	0.29	+0.3
2,206,579	+		CCNA_02057	0.29	+1.6
2,206,579	+		CCNA_02057	0.29	+1.6
2,206,579	+		CCNA_02057	0.29	-0.0
2,206,579	+		CCNA_02057	0.29	-0.4
2,206,579	+		CCNA_02057	0.29	+2.6
2,206,579	+		CCNA_02057	0.29	-0.7
2,206,587	-		CCNA_02057	0.29	-1.7
2,206,587	-		CCNA_02057	0.29	+0.3
2,206,587	-		CCNA_02057	0.29	-0.4
2,206,587	-		CCNA_02057	0.29	-1.8
2,206,592	-		CCNA_02057	0.30	-0.6
2,206,618	+		CCNA_02057	0.31	-2.6
2,206,623	+		CCNA_02057	0.32	+1.6
2,206,631	-		CCNA_02057	0.32	-1.3
2,206,631	-		CCNA_02057	0.32	-1.1
2,206,631	-		CCNA_02057	0.32	+1.0
2,206,631	-		CCNA_02057	0.32	-0.7
2,206,631	-		CCNA_02057	0.32	-0.6
2,206,631	-		CCNA_02057	0.32	-1.0
2,206,633	+		CCNA_02057	0.32	-0.2
2,206,636	-		CCNA_02057	0.33	+0.6
2,206,662	+		CCNA_02057	0.34	-1.6
2,206,670	+		CCNA_02057	0.35	+0.6
2,206,670	-		CCNA_02057	0.35	-0.0
2,206,672	+		CCNA_02057	0.35	-0.0
2,206,678	-		CCNA_02057	0.36	-1.0
2,206,678	-		CCNA_02057	0.36	+1.0
2,206,678	-		CCNA_02057	0.36	-1.1
2,206,704	+		CCNA_02057	0.37	-1.5
2,206,757	+		CCNA_02057	0.41	-0.0
2,206,757	+		CCNA_02057	0.41	-0.6
2,206,757	+		CCNA_02057	0.41	-1.0
2,206,757	+		CCNA_02057	0.41	-0.6
2,206,765	-		CCNA_02057	0.42	-1.6
2,206,772	+		CCNA_02057	0.42	+2.6
2,206,802	+		CCNA_02057	0.44	-1.3
2,206,856	+		CCNA_02057	0.48	-0.7
2,206,856	+		CCNA_02057	0.48	-0.2
2,206,856	+		CCNA_02057	0.48	-2.2
2,206,856	+		CCNA_02057	0.48	-0.4
2,206,879	-		CCNA_02057	0.49	-0.2
2,206,947	+		CCNA_02057	0.54	+0.3
2,206,955	-		CCNA_02057	0.55	-0.4
2,207,011	+		CCNA_02057	0.59	+1.0
2,207,011	+		CCNA_02057	0.59	-0.6
2,207,011	+		CCNA_02057	0.59	-0.6
2,207,019	-		CCNA_02057	0.59	+0.6
2,207,019	-		CCNA_02057	0.59	+0.6
2,207,019	-		CCNA_02057	0.59	-0.9
2,207,019	-		CCNA_02057	0.59	-0.1
2,207,026	-		CCNA_02057	0.60	-1.7
2,207,033	+		CCNA_02057	0.60	+1.0
2,207,039	+		CCNA_02057	0.60	-0.2
2,207,041	-		CCNA_02057	0.61	-0.7
2,207,041	-		CCNA_02057	0.61	+0.6
2,207,041	-		CCNA_02057	0.61	-1.7
2,207,041	-		CCNA_02057	0.61	-0.7
2,207,041	-		CCNA_02057	0.61	+2.6
2,207,151	+		CCNA_02057	0.68	-0.9
2,207,151	+		CCNA_02057	0.68	+2.6
2,207,151	+		CCNA_02057	0.68	-1.2
2,207,151	-		CCNA_02057	0.68	-1.0
2,207,151	-		CCNA_02057	0.68	+0.8
2,207,159	-		CCNA_02057	0.69	+0.7
2,207,159	-		CCNA_02057	0.69	-1.6
2,207,159	-		CCNA_02057	0.69	-1.3
2,207,166	+		CCNA_02057	0.69	+0.5
2,207,169	-		CCNA_02057	0.69	-1.3
2,207,177	+		CCNA_02057	0.70	-0.7
2,207,177	+		CCNA_02057	0.70	+0.3
2,207,185	-		CCNA_02057	0.71	-0.4
2,207,199	+		CCNA_02057	0.71	-1.0
2,207,205	-		CCNA_02057	0.72	-3.1
2,207,205	-		CCNA_02057	0.72	-1.3
2,207,225	-		CCNA_02057	0.73	-0.5
2,207,227	-		CCNA_02057	0.73	-1.3
2,207,227	-		CCNA_02057	0.73	-1.0
2,207,248	+		CCNA_02057	0.75	+1.6
2,207,248	+		CCNA_02057	0.75	-2.3
2,207,248	+				+1.6
2,207,256	-		CCNA_02057	0.75	-1.2
2,207,258	+		CCNA_02057	0.76	-1.8
2,207,281	-		CCNA_02057	0.77	-0.2
2,207,281	-		CCNA_02057	0.77	+1.0
2,207,303	-		CCNA_02057	0.79	+0.3
2,207,309	-		CCNA_02057	0.79	+0.3
2,207,340	+		CCNA_02057	0.81	-1.7
2,207,348	-		CCNA_02057	0.82	+0.6
2,207,348	-		CCNA_02057	0.82	-0.6
2,207,354	-		CCNA_02057	0.82	-0.7
2,207,372	+		CCNA_02057	0.83	+0.3
2,207,378	-		CCNA_02057	0.84	-0.9
2,207,391	-		CCNA_02057	0.85	+2.0
2,207,393	+		CCNA_02057	0.85	-0.2
2,207,406	-		CCNA_02057	0.86	-1.1
2,207,422	+		CCNA_02057	0.87	-1.0
2,207,446	+		CCNA_02057	0.89	+0.3
2,207,575	-				+0.6
2,207,604	+				-0.8
2,207,617	+				+1.0
2,207,625	-				-0.1
2,207,625	-				-0.8
2,207,654	+				+0.5
2,207,662	-				+1.5
2,207,662	-				+0.2
2,207,683	+				-1.2
2,207,683	+				+0.4
2,207,819	-		CCNA_02058	0.17	-1.0
2,207,831	+		CCNA_02058	0.18	-1.1
2,207,877	+		CCNA_02058	0.22	-2.4
2,207,877	+		CCNA_02058	0.22	+1.6
2,207,877	+		CCNA_02058	0.22	-1.0
2,207,877	+		CCNA_02058	0.22	-1.7
2,207,877	+		CCNA_02058	0.22	-2.2
2,207,878	-		CCNA_02058	0.22	+1.4
2,207,878	-		CCNA_02058	0.22	+1.6
2,207,885	-		CCNA_02058	0.23	-1.4
2,207,885	-		CCNA_02058	0.23	-0.2
2,207,885	-		CCNA_02058	0.23	-0.0
2,207,885	-		CCNA_02058	0.23	+1.3
2,207,885	-		CCNA_02058	0.23	+1.0
2,207,921	-		CCNA_02058	0.26	-0.7
2,208,000	+		CCNA_02058	0.32	+0.1
2,208,001	+		CCNA_02058	0.32	-1.1
2,208,009	-		CCNA_02058	0.33	-0.7
2,208,122	-		CCNA_02058	0.42	+1.0
2,208,189	+		CCNA_02058	0.47	+1.6
2,208,189	+		CCNA_02058	0.47	+1.0
2,208,194	+		CCNA_02058	0.48	-2.2
2,208,194	+		CCNA_02058	0.48	+1.6
2,208,194	+		CCNA_02058	0.48	-2.6
2,208,197	-		CCNA_02058	0.48	+1.0
2,208,197	-		CCNA_02058	0.48	-1.6
2,208,202	-		CCNA_02058	0.49	+0.3
2,208,240	-		CCNA_02058	0.52	-0.2
2,208,313	-		CCNA_02058	0.58	-0.4
2,208,323	-		CCNA_02058	0.58	-1.6
2,208,324	-		CCNA_02058	0.58	+0.4
2,208,358	-		CCNA_02058	0.61	-0.2
2,208,468	+		CCNA_02058	0.70	+4.0
2,208,468	+		CCNA_02058	0.70	+1.7
2,208,497	-		CCNA_02058	0.73	-0.7
2,208,581	+		CCNA_02058	0.79	-0.4
2,208,581	+		CCNA_02058	0.79	-1.5
2,208,581	+		CCNA_02058	0.79	-0.0
2,208,584	-		CCNA_02058	0.80	-0.9
2,208,586	+		CCNA_02058	0.80	-1.1
2,208,594	-		CCNA_02058	0.81	-0.4
2,208,594	-		CCNA_02058	0.81	-1.0
2,208,606	-		CCNA_02058	0.82	+1.0
2,208,608	+		CCNA_02058	0.82	+0.7