Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01984

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,130,108	+				+4.4
2,130,111	+				+3.7
2,130,214	+		CCNA_01984	0.16	+1.1
2,130,221	+				+1.7
2,130,260	+		CCNA_01984	0.33	+0.7
2,130,332	+		CCNA_01984	0.61	+0.1
2,130,332	+		CCNA_01984	0.61	+0.6
2,130,332	+		CCNA_01984	0.61	-0.3
2,130,332	+		CCNA_01984	0.61	-1.1
2,130,332	+		CCNA_01984	0.61	-0.3
2,130,342	+		CCNA_01984	0.64	-1.5
2,130,377	+		CCNA_01984	0.78	-2.3
2,130,377	+		CCNA_01984	0.78	-0.3
2,130,383	-		CCNA_01984	0.80	+3.0
2,130,383	-		CCNA_01984	0.80	+0.0
2,130,383	-		CCNA_01984	0.80	+0.1
2,130,385	-		CCNA_01984	0.81	-1.3
2,130,385	-		CCNA_01984	0.81	-1.2
2,130,385	-		CCNA_01984	0.81	-2.2
2,130,385	-		CCNA_01984	0.81	+0.1
2,130,403	-		CCNA_01984	0.88	-1.1
2,130,413	-				+0.2
2,130,441	-				-0.8
2,130,478	-				+0.7
2,130,567	-				-0.8
2,130,592	+				-0.6
2,130,600	-				+0.8
2,130,600	-				+0.7
2,130,656	+		CCNA_01985	0.13	+0.4
2,130,742	+		CCNA_01985	0.18	+0.2
2,130,773	-		CCNA_01985	0.19	-0.5
2,130,843	+		CCNA_01985	0.23	+0.6
2,130,886	-		CCNA_01985	0.26	-0.5
2,130,888	+		CCNA_01985	0.26	+0.0
2,130,896	-		CCNA_01985	0.26	-0.2
2,130,896	-		CCNA_01985	0.26	+0.5
2,130,907	+		CCNA_01985	0.27	+0.5
2,130,907	+		CCNA_01985	0.27	+0.1
2,130,907	+		CCNA_01985	0.27	-0.2
2,130,907	+		CCNA_01985	0.27	-1.7
2,130,945	+		CCNA_01985	0.29	-0.7
2,130,953	-		CCNA_01985	0.29	-2.4
2,130,956	+		CCNA_01985	0.30	-0.2
2,130,970	-		CCNA_01985	0.30	+2.6
2,130,979	+		CCNA_01985	0.31	-1.2
2,130,980	+		CCNA_01985	0.31	-0.4
2,131,123	-		CCNA_01985	0.39	-0.4
2,131,176	+		CCNA_01985	0.42	-0.0
2,131,183	+		CCNA_01985	0.42	-0.8
2,131,185	+		CCNA_01985	0.43	+1.1
2,131,234	-		CCNA_01985	0.45	-2.1
2,131,245	-		CCNA_01985	0.46	-0.9
2,131,386	+		CCNA_01985	0.54	-1.1
2,131,386	+		CCNA_01985	0.54	-1.3
2,131,394	-		CCNA_01985	0.54	-0.1
2,131,433	-		CCNA_01985	0.57	-1.4