Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01955

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,099,404	-		CCNA_01954	0.71	+1.7
2,099,491	+		CCNA_01954	0.75	+2.8
2,099,572	+		CCNA_01954	0.78	+2.6
2,099,608	-		CCNA_01954	0.79	-1.7
2,099,608	-		CCNA_01954	0.79	-2.2
2,099,637	-		CCNA_01954	0.80	-0.3
2,099,722	-		CCNA_01954	0.83	-2.0
2,099,829	-		CCNA_01954	0.87	+0.1
2,099,887	-		CCNA_01954	0.89	-0.3
2,099,914	+				+3.5
2,099,914	+				+3.0
2,099,968	+				+3.8
2,099,968	-				+0.6
2,100,022	-				+3.0
2,100,031	-				+1.7
2,100,064	-				+1.7
2,100,158	+				+3.3
2,100,192	-				+1.1
2,100,245	+				-1.3
2,100,245	+				+0.6
2,100,253	-				+0.9
2,100,286	+				-0.3
2,100,323	-				+0.9
2,100,348	+				-0.5
2,100,409	+				+0.7
2,100,464	-		CCNA_01955	0.10	+0.1
2,100,466	+		CCNA_01955	0.10	-0.7
2,100,474	-		CCNA_01955	0.11	+2.3
2,100,519	-		CCNA_01955	0.14	+0.7
2,100,519	-		CCNA_01955	0.14	-0.5
2,100,530	+		CCNA_01955	0.15	-1.4
2,100,545	+		CCNA_01955	0.16	-1.1
2,100,558	-		CCNA_01955	0.17	+2.7
2,100,563	+		CCNA_01955	0.17	-0.7
2,100,569	+		CCNA_01955	0.18	-3.6
2,100,576	-		CCNA_01955	0.18	-0.3
2,100,586	+		CCNA_01955	0.19	-1.2
2,100,586	+		CCNA_01955	0.19	+1.4
2,100,598	+		CCNA_01955	0.20	-1.5
2,100,646	-		CCNA_01955	0.23	+2.7
2,100,836	-		CCNA_01955	0.36	-2.0
2,100,867	-		CCNA_01955	0.39	-0.7
2,100,905	-		CCNA_01955	0.41	-0.5
2,100,938	+		CCNA_01955	0.44	-1.2
2,100,946	+		CCNA_01955	0.44	-0.3
2,100,946	-		CCNA_01955	0.44	-2.1
2,100,946	-		CCNA_01955	0.44	-2.7
2,100,946	-		CCNA_01955	0.44	+2.7
2,100,946	-		CCNA_01955	0.44	-1.8
2,101,003	-		CCNA_01955	0.48	-0.9
2,101,013	-		CCNA_01955	0.49	-0.6
2,101,022	+		CCNA_01955	0.49	-2.0
2,101,030	-		CCNA_01955	0.50	+1.1
2,101,044	+		CCNA_01955	0.51	+0.3
2,101,052	-		CCNA_01955	0.52	-0.6
2,101,082	-		CCNA_01955	0.54	+1.1
2,101,089	+		CCNA_01955	0.54	+0.7
2,101,095	+		CCNA_01955	0.55	-0.3
2,101,120	+		CCNA_01955	0.56	-1.3
2,101,121	-		CCNA_01955	0.56	-0.9
2,101,200	+		CCNA_01955	0.62	+0.1
2,101,220	+		CCNA_01955	0.63	+0.4
2,101,252	-		CCNA_01955	0.66	-0.7
2,101,374	-		CCNA_01955	0.74	+1.3
2,101,374	-		CCNA_01955	0.74	+1.7
2,101,387	+		CCNA_01955	0.75	-0.2
2,101,412	+		CCNA_01955	0.77	+1.1
2,101,412	+		CCNA_01955	0.77	+0.7
2,101,433	+		CCNA_01955	0.78	+0.1
2,101,457	-		CCNA_01955	0.80	-0.5
2,101,537	+		CCNA_01955	0.86	-1.3
2,101,557	+		CCNA_01955	0.87	-1.5
2,101,607	+				-0.1
2,101,607	+				-1.2
2,101,698	-				-0.5
2,101,712	+				+0.5
2,101,722	+				+0.4
2,101,730	-				-0.6
2,101,730	-				-0.1
2,101,766	+				-0.2
2,101,801	+				-1.0
2,101,824	-				-0.1
2,101,840	-		CCNA_01956	0.10	-0.2
2,101,842	+		CCNA_01956	0.10	+1.1
2,101,842	+		CCNA_01956	0.10	-0.9
2,101,850	-		CCNA_01956	0.11	-0.3
2,101,850	-		CCNA_01956	0.11	+0.9
2,101,850	-		CCNA_01956	0.11	-0.4
2,101,903	+		CCNA_01956	0.19	-0.5
2,102,008	-		CCNA_01956	0.33	-0.3
2,102,023	-		CCNA_01956	0.35	-2.4
2,102,112	+		CCNA_01956	0.47	-1.0
2,102,138	-		CCNA_01956	0.50	-0.3
2,102,166	-		CCNA_01956	0.54	-1.5
2,102,189	+		CCNA_01956	0.57	-1.0
2,102,190	-		CCNA_01956	0.57	+0.4
2,102,208	+		CCNA_01956	0.60	-1.2
2,102,214	+		CCNA_01956	0.61	-1.5
2,102,214	+		CCNA_01956	0.61	-0.4
2,102,214	+		CCNA_01956	0.61	+0.4
2,102,222	+		CCNA_01956	0.62	-0.6
2,102,222	+		CCNA_01956	0.62	-0.5
2,102,222	+		CCNA_01956	0.62	-1.3
2,102,222	-		CCNA_01956	0.62	-1.9
2,102,270	+		CCNA_01956	0.68	+0.7
2,102,275	+		CCNA_01956	0.69	-0.6
2,102,316	+		CCNA_01956	0.74	+0.5
2,102,316	+		CCNA_01956	0.74	+0.7
2,102,316	+		CCNA_01956	0.74	+0.2
2,102,316	+		CCNA_01956	0.74	+0.4
2,102,316	+		CCNA_01956	0.74	-0.0
2,102,324	-		CCNA_01956	0.75	-0.3
2,102,324	-		CCNA_01956	0.75	-0.1
2,102,324	-		CCNA_01956	0.75	+1.7
2,102,324	-		CCNA_01956	0.75	+0.7
2,102,324	-		CCNA_01956	0.75	-0.7
2,102,324	-		CCNA_01956	0.75	-0.1
2,102,330	+		CCNA_01956	0.76	-0.6
2,102,358	+		CCNA_01956	0.80	+0.5
2,102,366	-		CCNA_01956	0.81	-1.0
2,102,384	+		CCNA_01956	0.84	+0.3
2,102,392	-		CCNA_01956	0.85	+0.4
2,102,392	-		CCNA_01956	0.85	-2.7
2,102,406	+		CCNA_01956	0.87	-0.6
2,102,434	-				-0.5
2,102,453	+				-1.8
2,102,453	+				-0.6
2,102,453	+				+0.6
2,102,490	+				-0.3
2,102,498	-				-0.2
2,102,498	-				-0.3
2,102,500	+				+1.1
2,102,508	-				-2.5
2,102,530	+				+0.7
2,102,538	-				-0.4
2,102,541	+				+1.3
2,102,554	-				+1.1
2,102,570	+				-0.5
2,102,593	-				+3.1
2,102,599	+				+1.1
2,102,607	-				+1.9
2,102,607	-				+1.2
2,102,609	+				-1.1