Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01754

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
1,880,376	+		CCNA_01752	0.64	+1.5
1,880,393	+		CCNA_01752	0.66	+2.0
1,880,393	+		CCNA_01752	0.66	+2.3
1,880,403	+		CCNA_01752	0.67	+1.9
1,880,479	+		CCNA_01752	0.76	+0.4
1,880,479	+		CCNA_01752	0.76	+1.1
1,880,487	-		CCNA_01752	0.76	+1.3
1,880,523	+		CCNA_01752	0.80	+1.7
1,880,523	+		CCNA_01752	0.80	+2.3
1,880,567	+		CCNA_01752	0.85	+2.3
1,880,586	+		CCNA_01752	0.88	+1.4
1,880,623	-				-0.1
1,880,623	-				+0.1
1,880,636	+				+1.6
1,880,644	-				-0.9
1,880,651	-				-0.5
1,880,659	-				+0.6
1,881,322	+				+0.3
1,881,322	+				+1.1
1,881,330	-				+1.9
1,881,330	-				-0.9
1,881,330	-				+1.4
1,881,330	-				-0.4
1,881,382	+				+1.1
1,881,553	-		CCNA_01754	0.61	-1.2
1,881,610	+		CCNA_01754	0.79	-0.6
1,881,625	+		CCNA_01754	0.84	-0.5
1,881,641	-		CCNA_01754	0.90	-0.4
1,881,660	-				+2.9
1,881,660	-				+0.3
1,881,660	-				+0.6
1,881,681	-				-2.2
1,881,710	+				-1.8
1,881,710	+				-0.9
1,881,710	+				+0.4
1,881,710	+				+2.2
1,881,710	+				+0.9
1,881,710	+				+0.9
1,881,718	-				-0.2
1,881,718	-				-0.8
1,881,822	-				+0.3
1,881,827	+				-1.5
1,881,835	-				+0.4
1,881,883	+				-0.9
1,881,891	-				+1.4
1,881,891	-				+0.8
1,881,912	-				+2.3
1,881,990	+		CCNA_01755	0.12	-0.5
1,881,998	-		CCNA_01755	0.13	-0.4
1,882,017	+		CCNA_01755	0.14	+0.2
1,882,036	+		CCNA_01755	0.15	-0.8
1,882,055	-		CCNA_01755	0.16	+0.4
1,882,068	+		CCNA_01755	0.17	+0.3
1,882,068	+		CCNA_01755	0.17	+1.3
1,882,079	+		CCNA_01755	0.18	+0.3
1,882,079	+		CCNA_01755	0.18	+1.1
1,882,081	-		CCNA_01755	0.18	-0.1
1,882,127	+		CCNA_01755	0.21	+1.9
1,882,137	+		CCNA_01755	0.21	-0.5
1,882,145	-		CCNA_01755	0.22	+0.7
1,882,150	-		CCNA_01755	0.22	+0.1
1,882,150	-		CCNA_01755	0.22	-0.1
1,882,182	-		CCNA_01755	0.24	+0.3
1,882,227	+		CCNA_01755	0.27	+0.6
1,882,255	+		CCNA_01755	0.28	-1.7
1,882,272	+		CCNA_01755	0.29	-0.5
1,882,273	+		CCNA_01755	0.30	+1.7
1,882,273	+		CCNA_01755	0.30	-0.4
1,882,281	-		CCNA_01755	0.30	+0.5
1,882,281	-		CCNA_01755	0.30	-0.6
1,882,295	+		CCNA_01755	0.31	-0.5
1,882,306	+		CCNA_01755	0.32	-0.3
1,882,384	-		CCNA_01755	0.36	-0.1
1,882,413	+		CCNA_01755	0.38	+0.3
1,882,452	+		CCNA_01755	0.40	+1.0
1,882,491	+		CCNA_01755	0.43	-0.8
1,882,493	-		CCNA_01755	0.43	+0.6
1,882,539	+		CCNA_01755	0.46	-0.9
1,882,586	+		CCNA_01755	0.48	-2.6
1,882,600	+		CCNA_01755	0.49	+0.9
1,882,623	-		CCNA_01755	0.51	+0.5
1,882,628	-		CCNA_01755	0.51	-0.4
1,882,663	+		CCNA_01755	0.53	+1.7