Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01591

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
1,711,760	+				+0.7
1,711,793	+		CCNA_01591	0.13	+0.3
1,711,800	-		CCNA_01591	0.15	-1.3
1,711,805	-		CCNA_01591	0.15	-0.3
1,711,836	+		CCNA_01591	0.20	-0.6
1,711,838	+		CCNA_01591	0.21	-0.2
1,711,870	+		CCNA_01591	0.26	+1.3
1,711,872	+		CCNA_01591	0.26	+1.8
1,711,936	-		CCNA_01591	0.36	-1.0
1,711,947	+		CCNA_01591	0.38	+0.0
1,711,947	+		CCNA_01591	0.38	-0.3
1,711,952	+		CCNA_01591	0.39	+0.0
1,711,965	-		CCNA_01591	0.41	+1.8
1,711,967	-		CCNA_01591	0.41	+1.3
1,711,974	+		CCNA_01591	0.42	-1.2
1,711,974	+		CCNA_01591	0.42	-1.2
1,712,088	+		CCNA_01591	0.60	-1.2
1,712,114	+		CCNA_01591	0.64	+0.3
1,712,176	+		CCNA_01591	0.74	-0.7
1,712,184	-		CCNA_01591	0.76	-0.9
1,712,297	-				-1.2
1,712,331	+				-1.0
1,712,422	-				-0.9
1,712,422	-				+0.5
1,712,463	-				+1.3
1,712,547	-		CCNA_01592	0.22	+0.8
1,712,569	+		CCNA_01592	0.27	+1.0
1,712,570	+		CCNA_01592	0.27	+0.1
1,712,611	+		CCNA_01592	0.37	-0.5
1,712,619	-		CCNA_01592	0.39	-1.5
1,712,624	-		CCNA_01592	0.40	-0.5
1,712,624	-		CCNA_01592	0.40	-2.0
1,712,626	+		CCNA_01592	0.40	+1.1
1,712,626	+		CCNA_01592	0.40	-0.9
1,712,626	+		CCNA_01592	0.40	-0.2
1,712,631	+		CCNA_01592	0.41	+1.3
1,712,634	-		CCNA_01592	0.42	+0.8
1,712,634	-		CCNA_01592	0.42	+0.9
1,712,653	+		CCNA_01592	0.47	-1.0
1,712,682	+		CCNA_01592	0.53	-0.8
1,712,708	+		CCNA_01592	0.59	-0.4
1,712,755	+		CCNA_01592	0.70	+1.8
1,712,761	-		CCNA_01592	0.72	-2.0
1,712,763	-		CCNA_01592	0.72	+0.5
1,712,800	+		CCNA_01592	0.81	+0.5
1,712,848	+				+1.5
1,712,848	+				+0.6
1,712,848	+				-0.3
1,712,920	+				+1.8
1,712,960	+				-0.0
1,712,964	+				-0.3
1,712,972	-				+1.2
1,713,026	-				+2.7
1,713,084	-				+1.8