Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01535

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
1,642,706	-		CCNA_01533	0.58	-0.5
1,642,799	+		CCNA_01533	0.72	+3.3
1,642,799	+		CCNA_01533	0.72	+1.5
1,642,799	+		CCNA_01533	0.72	+1.4
1,642,804	+		CCNA_01533	0.73	+1.7
1,642,814	+		CCNA_01533	0.74	+2.2
1,642,832	-		CCNA_01533	0.77	+0.2
1,642,864	+		CCNA_01533	0.81	+1.5
1,642,866	+				+0.8
1,642,873	-		CCNA_01533	0.83	-0.8
1,642,957	-				+0.5
1,642,970	+				+0.6
1,642,970	+				+0.8
1,642,970	+				+1.8
1,642,970	+				+1.7
1,642,970	+				+2.0
1,642,978	-				+0.8
1,642,978	-				-0.8
1,643,037	+				-0.1
1,643,071	+		CCNA_01534	0.15	+1.0
1,643,076	+		CCNA_01534	0.17	+2.2
1,643,079	-		CCNA_01534	0.17	+0.5
1,643,198	+		CCNA_01534	0.47	+0.0
1,643,239	-		CCNA_01534	0.57	+1.8
1,643,274	+		CCNA_01534	0.66	+0.7
1,643,282	-		CCNA_01534	0.68	-0.2
1,643,305	+		CCNA_01534	0.74	+0.1
1,643,308	-		CCNA_01534	0.75	+0.5
1,643,308	-		CCNA_01534	0.75	+1.2
1,643,310	+		CCNA_01534	0.75	+0.5
1,643,343	+		CCNA_01534	0.83	+0.9
1,643,408	-				-0.5
1,643,421	+				+1.7
1,643,487	+				+1.1
1,643,655	+				+2.0
1,644,318	+				+2.4
1,644,318	+				+2.0
1,644,318	+				+2.1
1,644,318	+				+1.5
1,644,344	+				-0.0
1,644,352	-				+0.5
1,644,402	+		CCNA_01536	0.12	+2.8
1,644,427	-		CCNA_01536	0.16	+0.0
1,644,438	-		CCNA_01536	0.17	-0.3
1,644,469	-		CCNA_01536	0.22	-0.3
1,644,508	-		CCNA_01536	0.27	+0.8
1,644,521	+		CCNA_01536	0.29	+0.7
1,644,529	-		CCNA_01536	0.31	+0.5
1,644,529	-		CCNA_01536	0.31	+0.2
1,644,530	-				+2.2
1,644,548	+		CCNA_01536	0.33	-0.0
1,644,551	-		CCNA_01536	0.34	-0.3
1,644,556	-		CCNA_01536	0.35	+0.2
1,644,607	+		CCNA_01536	0.42	-0.9
1,644,612	+		CCNA_01536	0.43	+0.7
1,644,617	+		CCNA_01536	0.43	+0.2
1,644,699	+		CCNA_01536	0.56	+3.1
1,644,745	+		CCNA_01536	0.62	+2.2
1,644,753	+		CCNA_01536	0.63	+1.8
1,644,753	-		CCNA_01536	0.63	+1.8
1,644,753	-		CCNA_01536	0.63	-0.8
1,644,818	+		CCNA_01536	0.73	+0.6
1,644,835	-		CCNA_01536	0.75	+0.5
1,644,861	+		CCNA_01536	0.79	+1.3
1,644,953	+				+2.5
1,644,956	-				+0.2
1,644,956	-				+3.7
1,644,982	-				+0.2
1,644,982	-				-1.9
1,644,996	+				+1.5
1,644,996	+				+2.2
1,644,996	+				+2.5
1,644,996	+				+0.2
1,644,996	+				+1.2
1,644,996	+				+1.2
1,645,004	-				+1.8
1,645,009	-				-0.6
1,645,024	-				+1.8
1,645,045	+				+0.2
1,645,045	+				+1.2
1,645,045	+				+1.7
1,645,045	+				+1.3
1,645,045	+				+1.4
1,645,045	+				+1.7
1,645,045	+				+1.2
1,645,045	+				+0.3
1,645,045	+				-0.5
1,645,045	+				+1.2
1,645,045	+				+1.7
1,645,053	-				-1.3
1,645,053	-				-0.2
1,645,053	-				-0.5
1,645,053	-				-0.8
1,645,128	+				+0.2
1,645,128	+				-0.4
1,645,146	-				+0.8