Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01236

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
1,362,105	+		CCNA_01234	0.78	-0.6
1,362,146	-		CCNA_01234	0.82	-1.3
1,362,296	+				-1.3
1,362,304	-				+0.7
1,362,315	+				-0.3
1,362,367	+				+2.9
1,362,367	+				+1.9
1,362,367	+				+1.2
1,362,367	+				+1.0
1,362,367	+				-0.3
1,362,369	+				-0.1
1,362,372	+				-0.7
1,362,375	-				+0.4
1,362,375	-				-1.8
1,362,422	+				+3.9
1,362,422	+				+4.2
1,362,474	+		CCNA_01235	0.11	+3.3
1,362,484	+		CCNA_01235	0.13	+3.4
1,362,498	+		CCNA_01235	0.15	+3.9
1,362,508	+		CCNA_01235	0.17	+3.5
1,362,518	+		CCNA_01235	0.18	+3.3
1,362,536	-		CCNA_01235	0.21	-0.3
1,362,562	-		CCNA_01235	0.25	-0.9
1,362,606	-		CCNA_01235	0.32	+0.7
1,362,616	-		CCNA_01235	0.34	-0.5
1,362,651	+		CCNA_01235	0.39	+3.6
1,362,651	+		CCNA_01235	0.39	+2.6
1,362,675	+		CCNA_01235	0.43	+1.5
1,362,683	-		CCNA_01235	0.44	+0.4
1,362,685	+		CCNA_01235	0.45	+3.1
1,362,687	+		CCNA_01235	0.45	+2.7
1,362,687	+		CCNA_01235	0.45	+3.1
1,362,695	-		CCNA_01235	0.46	-0.1
1,362,695	-		CCNA_01235	0.46	+0.7
1,362,756	+		CCNA_01235	0.56	+2.1
1,362,822	+		CCNA_01235	0.66	+2.7
1,362,822	+		CCNA_01235	0.66	+3.0
1,362,822	-		CCNA_01235	0.66	+0.1
1,362,827	+		CCNA_01235	0.67	+2.5
1,362,878	+		CCNA_01235	0.75	+2.5
1,362,896	+		CCNA_01235	0.78	+2.8
1,362,897	+		CCNA_01235	0.78	+2.9
1,362,916	+		CCNA_01235	0.81	+2.7
1,362,916	+		CCNA_01235	0.81	+3.2
1,362,924	-		CCNA_01235	0.82	-1.4
1,362,931	-		CCNA_01235	0.83	+1.1
1,362,961	-		CCNA_01235	0.88	-1.6
1,363,007	+				-0.8
1,363,011	+				+1.1
1,363,011	+				+0.4
1,363,011	+				+0.8
1,363,011	+				+0.7
1,363,015	-				+1.7
1,363,017	-				+0.1
1,363,019	-				-1.6
1,363,062	+				-0.3
1,363,063	+				-0.8
1,363,119	+				-0.7
1,363,134	+		CCNA_01236	0.15	+1.7
1,363,134	+		CCNA_01236	0.15	-0.5
1,363,142	-		CCNA_01236	0.18	-1.1
1,363,322	-				+1.1
1,363,385	+		CCNA_01237	0.37	+0.1
1,363,434	-		CCNA_01237	0.69	-1.9
1,363,450	-		CCNA_01237	0.79	+1.9
1,363,450	-		CCNA_01237	0.79	+2.7
1,363,484	-				-1.6
1,363,511	-				-1.3
1,363,559	+				+1.4
1,363,579	+				-0.6
1,363,581	+				-0.1
1,363,589	-				+0.8
1,363,589	-				-0.3
1,363,596	+				-0.1
1,363,729	-		CCNA_01238	0.13	+0.3
1,363,771	-		CCNA_01238	0.19	-2.5
1,363,773	-		CCNA_01238	0.19	+0.4
1,363,899	+		CCNA_01238	0.36	+0.7
1,363,899	+		CCNA_01238	0.36	-0.0
1,363,899	-		CCNA_01238	0.36	-0.1
1,363,955	-		CCNA_01238	0.44	-0.2
1,363,955	-		CCNA_01238	0.44	-1.0
1,364,061	+		CCNA_01238	0.58	+1.1
1,364,116	+		CCNA_01238	0.66	-0.6
1,364,116	+		CCNA_01238	0.66	-0.9
1,364,116	+		CCNA_01238	0.66	+0.1
1,364,116	+		CCNA_01238	0.66	+0.4
1,364,168	+		CCNA_01238	0.73	-2.4
1,364,268	+		CCNA_01238	0.87	+1.3
1,364,288	+		CCNA_01238	0.89	+1.1
1,364,322	-				+0.4