Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00129
Experiment: PYE with nitrite 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | PYE with nitrite 5 mM |
---|---|---|---|---|---|
remove | |||||
138,542 | - | +2.5 | |||
138,578 | - | +2.3 | |||
138,589 | + | +0.4 | |||
138,592 | + | CCNA_00129 | 0.10 | +0.7 | |
138,609 | - | CCNA_00129 | 0.15 | +0.5 | |
138,626 | - | CCNA_00129 | 0.20 | +2.0 | |
138,636 | - | CCNA_00129 | 0.22 | +0.1 | |
138,659 | - | CCNA_00129 | 0.29 | +1.2 | |
138,701 | + | CCNA_00129 | 0.40 | +0.7 | |
138,709 | - | CCNA_00129 | 0.42 | +1.3 | |
138,747 | - | CCNA_00129 | 0.53 | +1.5 | |
138,765 | - | CCNA_00129 | 0.58 | +1.4 | |
138,821 | - | CCNA_00129 | 0.73 | +2.1 | |
138,872 | - | CCNA_00129 | 0.87 | +2.2 | |
138,895 | + | -1.6 |
Or see this region's nucleotide sequence