Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS07150

Experiment: rhizosphere EcoFAB sample 2; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	rhizosphere EcoFAB sample 2; outgrowth in LB
1,511,104	-		ABZR87_RS07145	0.18	+1.6
1,511,131	+		ABZR87_RS07145	0.20	+0.3
1,511,131	+		ABZR87_RS07145	0.20	-0.6
1,511,131	+		ABZR87_RS07145	0.20	+2.1
1,511,131	+		ABZR87_RS07145	0.20	+0.6
1,511,132	-		ABZR87_RS07145	0.20	+1.7
1,511,132	-		ABZR87_RS07145	0.20	+0.4
1,511,133	+		ABZR87_RS07145	0.20	+0.1
1,511,133	+		ABZR87_RS07145	0.20	-0.2
1,511,133	+		ABZR87_RS07145	0.20	+1.9
1,511,133	+		ABZR87_RS07145	0.20	-0.1
1,511,133	+		ABZR87_RS07145	0.20	-0.8
1,511,133	+		ABZR87_RS07145	0.20	+0.1
1,511,133	+		ABZR87_RS07145	0.20	-0.0
1,511,133	+		ABZR87_RS07145	0.20	-0.4
1,511,133	+		ABZR87_RS07145	0.20	-1.0
1,511,133	+		ABZR87_RS07145	0.20	-0.7
1,511,134	-		ABZR87_RS07145	0.20	+0.4
1,511,134	-		ABZR87_RS07145	0.20	+0.3
1,511,134	-		ABZR87_RS07145	0.20	+0.3
1,511,134	-		ABZR87_RS07145	0.20	+0.7
1,511,134	-		ABZR87_RS07145	0.20	-1.2
1,511,134	-		ABZR87_RS07145	0.20	-1.6
1,511,134	-		ABZR87_RS07145	0.20	+0.8
1,511,134	-		ABZR87_RS07145	0.20	-1.6
1,511,134	-		ABZR87_RS07145	0.20	+1.8
1,511,134	-		ABZR87_RS07145	0.20	+0.3
1,511,134	-		ABZR87_RS07145	0.20	-0.2
1,511,134	-		ABZR87_RS07145	0.20	+0.2
1,511,134	-		ABZR87_RS07145	0.20	+0.3
1,511,137	+		ABZR87_RS07145	0.20	+1.4
1,511,137	+		ABZR87_RS07145	0.20	-0.2
1,511,137	+		ABZR87_RS07145	0.20	-0.1
1,511,137	+		ABZR87_RS07145	0.20	-2.2
1,511,137	+		ABZR87_RS07145	0.20	+0.9
1,511,137	+		ABZR87_RS07145	0.20	-0.2
1,511,137	+		ABZR87_RS07145	0.20	+0.5
1,511,137	+		ABZR87_RS07145	0.20	+0.3
1,511,138	-		ABZR87_RS07145	0.20	+0.7
1,511,138	-		ABZR87_RS07145	0.20	+1.0
1,511,138	-		ABZR87_RS07145	0.20	+0.2
1,511,138	-		ABZR87_RS07145	0.20	+0.6
1,511,154	+		ABZR87_RS07145	0.22	-0.2
1,511,155	-		ABZR87_RS07145	0.22	-0.2
1,511,169	+		ABZR87_RS07145	0.23	-0.3
1,511,169	+		ABZR87_RS07145	0.23	+1.2
1,511,169	+		ABZR87_RS07145	0.23	+0.8
1,511,169	+		ABZR87_RS07145	0.23	+0.6
1,511,169	+		ABZR87_RS07145	0.23	+0.7
1,511,169	+		ABZR87_RS07145	0.23	-1.4
1,511,169	+		ABZR87_RS07145	0.23	+0.4
1,511,169	+		ABZR87_RS07145	0.23	+0.6
1,511,169	+		ABZR87_RS07145	0.23	+1.0
1,511,170	-		ABZR87_RS07145	0.23	-2.3
1,511,170	-		ABZR87_RS07145	0.23	-2.3
1,511,170	-		ABZR87_RS07145	0.23	-0.3
1,511,170	-		ABZR87_RS07145	0.23	+0.4
1,511,170	-		ABZR87_RS07145	0.23	+0.5
1,511,170	-		ABZR87_RS07145	0.23	-1.2
1,511,170	-		ABZR87_RS07145	0.23	+1.5
1,511,170	-		ABZR87_RS07145	0.23	+0.6
1,511,170	-		ABZR87_RS07145	0.23	+1.2
1,511,173	+		ABZR87_RS07145	0.23	+1.1
1,511,173	+		ABZR87_RS07145	0.23	+0.7
1,511,173	+		ABZR87_RS07145	0.23	+0.8
1,511,173	+		ABZR87_RS07145	0.23	+0.1
1,511,173	+		ABZR87_RS07145	0.23	-1.3
1,511,174	-		ABZR87_RS07145	0.23	+1.3
1,511,174	-		ABZR87_RS07145	0.23	+0.1
1,511,222	-		ABZR87_RS07145	0.27	+0.9
1,511,258	+		ABZR87_RS07145	0.30	-0.2
1,511,258	+		ABZR87_RS07145	0.30	-0.6
1,511,258	+		ABZR87_RS07145	0.30	+1.9
1,511,259	-		ABZR87_RS07145	0.30	-0.3
1,511,259	-		ABZR87_RS07145	0.30	-0.7
1,511,259	-		ABZR87_RS07145	0.30	-0.2
1,511,273	+		ABZR87_RS07145	0.32	+0.0
1,511,273	+		ABZR87_RS07145	0.32	-0.2
1,511,273	+		ABZR87_RS07145	0.32	+0.3
1,511,274	-		ABZR87_RS07145	0.32	+0.1
1,511,274	-		ABZR87_RS07145	0.32	-3.0
1,511,274	-		ABZR87_RS07145	0.32	+0.8
1,511,274	-		ABZR87_RS07145	0.32	-1.6
1,511,274	-		ABZR87_RS07145	0.32	-0.9
1,511,330	+		ABZR87_RS07145	0.36	+1.2
1,511,331	-		ABZR87_RS07145	0.37	+1.1
1,511,331	-		ABZR87_RS07145	0.37	-1.0
1,511,362	-		ABZR87_RS07145	0.39	+0.5
1,511,423	-		ABZR87_RS07145	0.44	-0.4
1,511,423	-		ABZR87_RS07145	0.44	+0.2
1,511,423	-		ABZR87_RS07145	0.44	+0.1
1,511,423	-		ABZR87_RS07145	0.44	-0.3
1,511,430	+		ABZR87_RS07145	0.45	-0.2
1,511,431	-		ABZR87_RS07145	0.45	-0.0
1,511,431	-		ABZR87_RS07145	0.45	-2.3
1,511,431	-		ABZR87_RS07145	0.45	-0.5
1,511,512	+		ABZR87_RS07145	0.52	-1.5
1,511,512	+		ABZR87_RS07145	0.52	+0.5
1,511,512	+		ABZR87_RS07145	0.52	-0.3
1,511,512	+		ABZR87_RS07145	0.52	-1.3
1,511,513	-		ABZR87_RS07145	0.52	+0.0
1,511,625	+		ABZR87_RS07145	0.61	-0.1
1,511,625	+		ABZR87_RS07145	0.61	-1.8
1,511,625	+		ABZR87_RS07145	0.61	-0.6
1,511,626	-		ABZR87_RS07145	0.61	-0.6
1,511,745	+		ABZR87_RS07145	0.71	+0.0
1,511,745	+		ABZR87_RS07145	0.71	-1.9
1,511,745	+		ABZR87_RS07145	0.71	+0.6
1,511,746	-		ABZR87_RS07145	0.71	-1.0
1,511,746	-		ABZR87_RS07145	0.71	-0.4
1,511,746	-		ABZR87_RS07145	0.71	-0.9
1,511,760	+		ABZR87_RS07145	0.72	-0.8
1,511,761	-		ABZR87_RS07145	0.72	-0.1
1,511,761	-		ABZR87_RS07145	0.72	+0.5
1,511,761	-		ABZR87_RS07145	0.72	+0.5
1,511,761	-		ABZR87_RS07145	0.72	+0.8
1,511,761	-		ABZR87_RS07145	0.72	+0.7
1,511,780	+		ABZR87_RS07145	0.74	-0.2
1,511,780	+		ABZR87_RS07145	0.74	-0.1
1,511,781	-		ABZR87_RS07145	0.74	+0.4
1,511,810	+		ABZR87_RS07145	0.77	+0.9
1,511,810	+		ABZR87_RS07145	0.77	+0.6
1,511,819	+		ABZR87_RS07145	0.77	-0.7
1,511,819	+		ABZR87_RS07145	0.77	+0.2
1,511,820	-		ABZR87_RS07145	0.77	+0.7
1,511,820	-		ABZR87_RS07145	0.77	+0.0
1,511,820	-		ABZR87_RS07145	0.77	+1.2
1,511,824	-		ABZR87_RS07145	0.78	+0.5
1,511,824	-		ABZR87_RS07145	0.78	+0.0
1,511,824	-		ABZR87_RS07145	0.78	-0.5
1,511,824	-		ABZR87_RS07145	0.78	+0.5
1,511,824	-		ABZR87_RS07145	0.78	+0.2
1,511,824	-		ABZR87_RS07145	0.78	-0.5
1,511,824	-		ABZR87_RS07145	0.78	+0.8
1,511,824	-		ABZR87_RS07145	0.78	+1.1
1,511,875	+		ABZR87_RS07145	0.82	-1.9
1,511,875	+		ABZR87_RS07145	0.82	+1.0
1,511,875	+		ABZR87_RS07145	0.82	-1.5
1,511,875	+		ABZR87_RS07145	0.82	+1.6
1,511,875	+		ABZR87_RS07145	0.82	-1.0
1,511,875	+		ABZR87_RS07145	0.82	+0.0
1,511,875	+		ABZR87_RS07145	0.82	+0.2
1,511,876	-		ABZR87_RS07145	0.82	-0.5
1,511,876	-		ABZR87_RS07145	0.82	+0.8
1,511,876	-		ABZR87_RS07145	0.82	+0.4
1,511,876	-		ABZR87_RS07145	0.82	-0.1
1,511,876	-		ABZR87_RS07145	0.82	+0.1
1,511,876	-		ABZR87_RS07145	0.82	-0.2
1,511,876	-		ABZR87_RS07145	0.82	+0.5
1,511,882	+		ABZR87_RS07145	0.83	+0.4
1,511,882	+		ABZR87_RS07145	0.83	-1.1
1,511,882	+		ABZR87_RS07145	0.83	-0.2
1,511,882	+		ABZR87_RS07145	0.83	-1.6
1,511,882	+		ABZR87_RS07145	0.83	+0.8
1,511,882	+		ABZR87_RS07145	0.83	-2.3
1,511,882	+		ABZR87_RS07145	0.83	-0.4
1,511,882	+		ABZR87_RS07145	0.83	-0.8
1,511,882	+		ABZR87_RS07145	0.83	+0.8
1,511,882	+		ABZR87_RS07145	0.83	+0.2
1,511,882	+		ABZR87_RS07145	0.83	-1.7
1,511,882	+		ABZR87_RS07145	0.83	+0.1
1,511,882	+		ABZR87_RS07145	0.83	+0.4
1,511,882	+		ABZR87_RS07145	0.83	-1.7
1,511,882	+		ABZR87_RS07145	0.83	+0.5
1,511,883	-		ABZR87_RS07145	0.83	+0.3
1,511,883	-		ABZR87_RS07145	0.83	-2.6
1,511,883	-		ABZR87_RS07145	0.83	-1.1
1,511,883	-		ABZR87_RS07145	0.83	-1.6
1,511,883	-		ABZR87_RS07145	0.83	+0.1
1,511,883	-		ABZR87_RS07145	0.83	-0.3
1,511,883	-		ABZR87_RS07145	0.83	-0.1
1,511,883	-		ABZR87_RS07145	0.83	+0.6
1,511,883	-		ABZR87_RS07145	0.83	+0.1
1,511,883	-		ABZR87_RS07145	0.83	-0.7
1,511,883	-		ABZR87_RS07145	0.83	-0.2
1,511,883	-		ABZR87_RS07145	0.83	-0.0
1,511,883	-		ABZR87_RS07145	0.83	+0.4
1,511,883	-		ABZR87_RS07145	0.83	-0.1
1,511,883	-		ABZR87_RS07145	0.83	-1.6
1,511,883	-		ABZR87_RS07145	0.83	-0.1
1,511,960	+		ABZR87_RS07145	0.89	-0.6
1,511,960	+		ABZR87_RS07145	0.89	+0.8
1,511,961	-		ABZR87_RS07145	0.89	-0.2
1,511,961	-		ABZR87_RS07145	0.89	+0.2
1,511,997	+				-0.2
1,511,998	-				+0.7
1,511,998	-				-0.4
1,512,045	+				+1.9
1,512,045	+				+0.0
1,512,065	+				+0.9
1,512,065	+				-0.0
1,512,066	-				-0.0
1,512,066	-				+1.5
1,512,066	-				+1.0
1,512,088	+				-1.7
1,512,088	+				-0.4
1,512,088	+				-0.1
1,512,088	+				+0.5
1,512,089	-				+0.4
1,512,089	-				+2.5
1,512,115	+				+0.3
1,512,115	+				-0.6
1,512,115	+				+1.4
1,512,115	+				-1.1
1,512,116	-				+0.2
1,512,116	-				+0.3
1,512,117	-				+0.4
1,512,154	+		ABZR87_RS07150	0.17	+0.1
1,512,154	+		ABZR87_RS07150	0.17	-0.8
1,512,154	+		ABZR87_RS07150	0.17	+0.1
1,512,154	+		ABZR87_RS07150	0.17	-0.0
1,512,154	+		ABZR87_RS07150	0.17	+0.5
1,512,198	+		ABZR87_RS07150	0.28	-0.7
1,512,198	+		ABZR87_RS07150	0.28	+1.2
1,512,198	+		ABZR87_RS07150	0.28	+0.8
1,512,198	+		ABZR87_RS07150	0.28	-0.1
1,512,199	-		ABZR87_RS07150	0.28	-0.5
1,512,221	+		ABZR87_RS07150	0.34	+0.0
1,512,221	+		ABZR87_RS07150	0.34	-0.7
1,512,221	+		ABZR87_RS07150	0.34	-0.5
1,512,221	+		ABZR87_RS07150	0.34	+0.6
1,512,221	+		ABZR87_RS07150	0.34	+0.1
1,512,221	+		ABZR87_RS07150	0.34	+0.1
1,512,221	+		ABZR87_RS07150	0.34	-0.3
1,512,222	-		ABZR87_RS07150	0.34	-1.1
1,512,222	-		ABZR87_RS07150	0.34	-1.0
1,512,222	-		ABZR87_RS07150	0.34	-2.0
1,512,222	-		ABZR87_RS07150	0.34	+0.7
1,512,331	+		ABZR87_RS07150	0.61	-0.1
1,512,332	-		ABZR87_RS07150	0.61	-0.5
1,512,332	-		ABZR87_RS07150	0.61	+0.4
1,512,332	-		ABZR87_RS07150	0.61	+0.1
1,512,332	-		ABZR87_RS07150	0.61	+0.5
1,512,332	-		ABZR87_RS07150	0.61	-0.0
1,512,332	-		ABZR87_RS07150	0.61	-0.2
1,512,387	+		ABZR87_RS07150	0.75	+1.2
1,512,388	-		ABZR87_RS07150	0.75	+1.1
1,512,388	-		ABZR87_RS07150	0.75	+1.5
1,512,410	+		ABZR87_RS07150	0.80	-0.1
1,512,410	+		ABZR87_RS07150	0.80	-0.4
1,512,410	+		ABZR87_RS07150	0.80	-0.1
1,512,411	-		ABZR87_RS07150	0.80	+0.3
1,512,419	+		ABZR87_RS07150	0.82	+1.0
1,512,419	+		ABZR87_RS07150	0.82	-0.4
1,512,420	-		ABZR87_RS07150	0.83	+0.1
1,512,420	-		ABZR87_RS07150	0.83	+0.9
1,512,420	-		ABZR87_RS07150	0.83	+0.1
1,512,447	+		ABZR87_RS07150	0.89	-1.2
1,512,447	+		ABZR87_RS07150	0.89	-0.2
1,512,468	+				+0.3
1,512,468	+				+1.4
1,512,469	-				+0.6
1,512,488	+				+0.5
1,512,488	+				+0.2
1,512,488	+				+0.4
1,512,488	+				-0.2
1,512,488	+				+0.4
1,512,489	-				-0.7
1,512,489	-				+0.9
1,512,489	-				+0.2
1,512,489	-				-0.1
1,512,492	+				-1.7
1,512,492	+				+0.4
1,512,492	+				-1.5
1,512,492	+				+0.0
1,512,492	+				+0.0
1,512,492	+				+0.5
1,512,492	+				+0.5
1,512,493	-				+0.5
1,512,493	-				+1.4
1,512,493	-				-0.6
1,512,493	-				+0.3
1,512,493	-				-0.2
1,512,493	-				-0.1
1,512,493	-				+0.9
1,512,493	-				+0.1
1,512,493	-				-0.6
1,512,493	-				-0.6
1,512,493	-				+0.5
1,512,565	+				-0.1
1,512,565	+				-0.1
1,512,565	+				+0.6
1,512,565	+				-0.1
1,512,565	+				+0.8
1,512,566	-				-0.7
1,512,566	-				+0.8
1,512,566	-				+0.4
1,512,566	-				+0.5
1,512,566	-				+0.6
1,512,566	-				+0.0
1,512,566	-				+1.3
1,512,566	-				-0.6
1,512,570	+				+0.1
1,512,570	+				-1.5
1,512,570	+				-1.1
1,512,571	-				+0.4
1,512,571	-				+0.5
1,512,571	-				-0.2
1,512,593	+				+0.4
1,512,616	+				-0.0
1,512,616	+				-0.1
1,512,616	+				-0.3
1,512,684	+		ABZR87_RS07155	0.26	+0.4
1,512,684	+		ABZR87_RS07155	0.26	-0.0
1,512,684	+		ABZR87_RS07155	0.26	-1.2
1,512,684	+		ABZR87_RS07155	0.26	-2.6
1,512,685	-		ABZR87_RS07155	0.27	-2.1
1,512,685	-		ABZR87_RS07155	0.27	+0.6
1,512,685	-		ABZR87_RS07155	0.27	+0.1
1,512,685	-		ABZR87_RS07155	0.27	-0.6
1,512,698	+		ABZR87_RS07155	0.32	-0.2
1,512,729	+		ABZR87_RS07155	0.44	-0.4
1,512,729	+		ABZR87_RS07155	0.44	+0.1
1,512,729	+		ABZR87_RS07155	0.44	-0.5
1,512,730	-		ABZR87_RS07155	0.44	-0.3
1,512,730	-		ABZR87_RS07155	0.44	+0.1
1,512,730	-		ABZR87_RS07155	0.44	-0.5
1,512,730	-		ABZR87_RS07155	0.44	+0.2
1,512,730	-		ABZR87_RS07155	0.44	-0.8
1,512,883	+				-0.1
1,512,883	+				+0.1
1,512,883	+				-5.2
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1,512,892	+				-2.1
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1,512,929	-				-0.1
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1,512,944	+				+0.9
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1,513,438	+		ABZR87_RS07160	0.21	-0.2
1,513,439	-		ABZR87_RS07160	0.21	-1.4
1,513,439	-		ABZR87_RS07160	0.21	-1.6
1,513,439	-		ABZR87_RS07160	0.21	+0.8
1,513,439	-		ABZR87_RS07160	0.21	+0.0
1,513,440	+		ABZR87_RS07160	0.22	-0.8
1,513,440	+		ABZR87_RS07160	0.22	-1.8
1,513,440	+		ABZR87_RS07160	0.22	-0.5
1,513,441	-		ABZR87_RS07160	0.22	-0.1
1,513,441	-		ABZR87_RS07160	0.22	-0.8
1,513,441	-		ABZR87_RS07160	0.22	-0.1
1,513,441	-		ABZR87_RS07160	0.22	-1.1
1,513,485	+		ABZR87_RS07160	0.31	-0.5