Experiment: 14 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3023 and DvMF_3024 are separated by 9 nucleotides DvMF_3024 and DvMF_3025 are separated by 310 nucleotides DvMF_3025 and DvMF_3026 are separated by 134 nucleotides
DvMF_3023: DvMF_3023 - ammonium transporter (RefSeq), at 3,816,895 to 3,818,472
_3023
DvMF_3024: DvMF_3024 - nitrogen regulatory protein P-II (RefSeq), at 3,818,482 to 3,818,820
_3024
DvMF_3025: DvMF_3025 - xanthine-guanine phosphoribosyltransferase (RefSeq), at 3,819,131 to 3,819,622
_3025
DvMF_3026: DvMF_3026 - basic membrane lipoprotein (RefSeq), at 3,819,757 to 3,820,899
_3026
Position (kb)
3819
3820 Strain fitness (log2 ratio)
-2
-1
0
1 at 3818.197 kb on - strand, within DvMF_3023 at 3818.224 kb on + strand, within DvMF_3023 at 3818.232 kb on - strand, within DvMF_3023 at 3818.288 kb on - strand, within DvMF_3023 at 3818.317 kb on + strand at 3818.546 kb on + strand, within DvMF_3024 at 3818.546 kb on + strand, within DvMF_3024 at 3818.546 kb on + strand, within DvMF_3024 at 3818.554 kb on - strand, within DvMF_3024 at 3818.554 kb on - strand, within DvMF_3024 at 3818.554 kb on - strand, within DvMF_3024 at 3818.715 kb on - strand, within DvMF_3024 at 3818.844 kb on + strand at 3819.029 kb on + strand at 3819.310 kb on + strand, within DvMF_3025 at 3820.180 kb on + strand, within DvMF_3026 at 3820.604 kb on + strand, within DvMF_3026
Per-strain Table
Position Strand Gene LocusTag Fraction 14 days starvation 37C remove 3,818,197 - DvMF_3023 0.83 +0.5 3,818,224 + DvMF_3023 0.84 +0.8 3,818,232 - DvMF_3023 0.85 -0.6 3,818,288 - DvMF_3023 0.88 -1.5 3,818,317 + +0.4 3,818,546 + DvMF_3024 0.19 -1.8 3,818,546 + DvMF_3024 0.19 -0.8 3,818,546 + DvMF_3024 0.19 -1.6 3,818,554 - DvMF_3024 0.21 -1.1 3,818,554 - DvMF_3024 0.21 -0.6 3,818,554 - DvMF_3024 0.21 -1.5 3,818,715 - DvMF_3024 0.69 +0.6 3,818,844 + -1.1 3,819,029 + -0.8 3,819,310 + DvMF_3025 0.36 -1.7 3,820,180 + DvMF_3026 0.37 -1.0 3,820,604 + DvMF_3026 0.74 -1.5
Or see this region's nucleotide sequence