Experiment: 14 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2698 and DvMF_2699 overlap by 4 nucleotides DvMF_2699 and DvMF_2700 overlap by 1 nucleotides DvMF_2700 and DvMF_2701 are separated by 6 nucleotides DvMF_2701 and DvMF_2702 are separated by 2 nucleotides
DvMF_2698: DvMF_2698 - methyltransferase FkbM family (RefSeq), at 3,413,532 to 3,415,271
_2698
DvMF_2699: DvMF_2699 - glycosyl transferase family 11 (RefSeq), at 3,415,268 to 3,416,110
_2699
DvMF_2700: DvMF_2700 - glycosyl transferase family 2 (RefSeq), at 3,416,110 to 3,417,864
_2700
DvMF_2701: DvMF_2701 - ABC-2 type transporter (RefSeq), at 3,417,871 to 3,418,695
_2701
DvMF_2702: DvMF_2702 - ABC transporter related (RefSeq), at 3,418,698 to 3,419,981
_2702
Position (kb)
3416
3417
3418 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3415.160 kb on + strand at 3415.232 kb on + strand at 3415.744 kb on + strand, within DvMF_2699 at 3416.348 kb on + strand, within DvMF_2700 at 3417.128 kb on - strand, within DvMF_2700 at 3417.141 kb on + strand, within DvMF_2700 at 3417.584 kb on + strand, within DvMF_2700 at 3417.599 kb on - strand, within DvMF_2700 at 3417.685 kb on - strand, within DvMF_2700 at 3418.688 kb on + strand at 3418.852 kb on + strand, within DvMF_2702
Per-strain Table
Position Strand Gene LocusTag Fraction 14 days starvation 37C remove 3,415,160 + -2.8 3,415,232 + -1.3 3,415,744 + DvMF_2699 0.56 -3.5 3,416,348 + DvMF_2700 0.14 -3.9 3,417,128 - DvMF_2700 0.58 -3.5 3,417,141 + DvMF_2700 0.59 -4.1 3,417,584 + DvMF_2700 0.84 -2.0 3,417,599 - DvMF_2700 0.85 -2.5 3,417,685 - DvMF_2700 0.90 -4.2 3,418,688 + -1.1 3,418,852 + DvMF_2702 0.12 -2.0
Or see this region's nucleotide sequence