Experiment: 14 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2480 and DvMF_2481 are separated by 123 nucleotides DvMF_2481 and DvMF_2482 are separated by 395 nucleotides DvMF_2482 and DvMF_2483 are separated by 371 nucleotides
DvMF_2480: DvMF_2480 - Rubredoxin-type Fe(Cys)4 protein (RefSeq), at 3,127,311 to 3,127,469
_2480
DvMF_2481: DvMF_2481 - desulfoferrodoxin (RefSeq), at 3,127,593 to 3,127,967
_2481
DvMF_2482: DvMF_2482 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 3,128,363 to 3,130,384
_2482
DvMF_2483: DvMF_2483 - multi-sensor hybrid histidine kinase (RefSeq), at 3,130,756 to 3,133,971
_2483
Position (kb)
3128
3129
3130
3131 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3127.792 kb on - strand, within DvMF_2481 at 3127.941 kb on + strand at 3127.941 kb on + strand at 3128.110 kb on + strand at 3128.147 kb on - strand at 3128.352 kb on - strand at 3128.354 kb on + strand at 3128.362 kb on - strand at 3128.628 kb on + strand, within DvMF_2482 at 3129.327 kb on + strand, within DvMF_2482 at 3129.411 kb on - strand, within DvMF_2482 at 3129.437 kb on + strand, within DvMF_2482 at 3129.508 kb on - strand, within DvMF_2482 at 3129.965 kb on - strand, within DvMF_2482 at 3130.028 kb on - strand, within DvMF_2482 at 3130.028 kb on - strand, within DvMF_2482 at 3130.188 kb on + strand at 3130.226 kb on - strand at 3130.422 kb on + strand at 3130.525 kb on + strand at 3130.758 kb on + strand at 3130.766 kb on - strand at 3130.770 kb on + strand at 3130.918 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 14 days starvation 37C remove 3,127,792 - DvMF_2481 0.53 -1.9 3,127,941 + -2.1 3,127,941 + +0.5 3,128,110 + -1.3 3,128,147 - -1.2 3,128,352 - -0.0 3,128,354 + -0.8 3,128,362 - -1.1 3,128,628 + DvMF_2482 0.13 -0.8 3,129,327 + DvMF_2482 0.48 -0.6 3,129,411 - DvMF_2482 0.52 -0.5 3,129,437 + DvMF_2482 0.53 -3.4 3,129,508 - DvMF_2482 0.57 -1.1 3,129,965 - DvMF_2482 0.79 -1.7 3,130,028 - DvMF_2482 0.82 -0.7 3,130,028 - DvMF_2482 0.82 -1.8 3,130,188 + +1.2 3,130,226 - -0.4 3,130,422 + -0.8 3,130,525 + -2.8 3,130,758 + -0.8 3,130,766 - +0.1 3,130,770 + -1.9 3,130,918 + +1.5
Or see this region's nucleotide sequence