Experiment: 14 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2386 and DvMF_2387 are separated by 704 nucleotides DvMF_2387 and DvMF_2388 overlap by 37 nucleotides
DvMF_2386: DvMF_2386 - cytochrome c nitrite reductase small subunit (RefSeq), at 3,015,682 to 3,016,158
_2386
DvMF_2387: DvMF_2387 - glutamate synthase (NADPH) (RefSeq), at 3,016,863 to 3,017,990
_2387
DvMF_2388: DvMF_2388 - ferredoxin-dependent glutamate synthase (RefSeq), at 3,017,954 to 3,019,588
_2388
Position (kb)
3016
3017
3018 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3015.893 kb on - strand, within DvMF_2386 at 3016.052 kb on - strand, within DvMF_2386 at 3016.063 kb on - strand, within DvMF_2386 at 3016.063 kb on - strand, within DvMF_2386 at 3016.293 kb on - strand at 3016.591 kb on + strand at 3017.085 kb on - strand, within DvMF_2387 at 3017.299 kb on + strand, within DvMF_2387 at 3017.335 kb on + strand, within DvMF_2387 at 3017.638 kb on - strand, within DvMF_2387 at 3017.839 kb on + strand, within DvMF_2387 at 3017.894 kb on + strand at 3017.927 kb on - strand at 3017.979 kb on + strand at 3018.033 kb on + strand at 3018.052 kb on + strand at 3018.097 kb on - strand at 3018.118 kb on - strand, within DvMF_2388 at 3018.234 kb on - strand, within DvMF_2388 at 3018.358 kb on + strand, within DvMF_2388 at 3018.442 kb on - strand, within DvMF_2388 at 3018.598 kb on - strand, within DvMF_2388 at 3018.610 kb on + strand, within DvMF_2388 at 3018.886 kb on - strand, within DvMF_2388
Per-strain Table
Position Strand Gene LocusTag Fraction 14 days starvation 37C remove 3,015,893 - DvMF_2386 0.44 -1.6 3,016,052 - DvMF_2386 0.78 -0.2 3,016,063 - DvMF_2386 0.80 -3.2 3,016,063 - DvMF_2386 0.80 -3.4 3,016,293 - -0.2 3,016,591 + +0.3 3,017,085 - DvMF_2387 0.20 -0.3 3,017,299 + DvMF_2387 0.39 -0.1 3,017,335 + DvMF_2387 0.42 -0.8 3,017,638 - DvMF_2387 0.69 -0.4 3,017,839 + DvMF_2387 0.87 -1.8 3,017,894 + -0.6 3,017,927 - -4.3 3,017,979 + -1.8 3,018,033 + -1.7 3,018,052 + -0.3 3,018,097 - -1.3 3,018,118 - DvMF_2388 0.10 -1.0 3,018,234 - DvMF_2388 0.17 +0.4 3,018,358 + DvMF_2388 0.25 +0.1 3,018,442 - DvMF_2388 0.30 -0.4 3,018,598 - DvMF_2388 0.39 -0.8 3,018,610 + DvMF_2388 0.40 -2.9 3,018,886 - DvMF_2388 0.57 -3.4
Or see this region's nucleotide sequence