Experiment: 14 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2209 and DvMF_2210 are separated by 24 nucleotides DvMF_2210 and DvMF_2211 are separated by 1 nucleotides
DvMF_2209: DvMF_2209 - MotA/TolQ/ExbB proton channel (RefSeq), at 2,763,274 to 2,764,032
_2209
DvMF_2210: DvMF_2210 - OmpA/MotB domain protein (RefSeq), at 2,764,057 to 2,764,980
_2210
DvMF_2211: DvMF_2211 - OmpA/MotB domain protein (RefSeq), at 2,764,982 to 2,765,917
_2211
Position (kb)
2764
2765 Strain fitness (log2 ratio)
-2
-1
0
1 at 2763.341 kb on - strand at 2763.581 kb on - strand, within DvMF_2209 at 2763.849 kb on + strand, within DvMF_2209 at 2764.049 kb on - strand at 2764.237 kb on + strand, within DvMF_2210 at 2764.237 kb on + strand, within DvMF_2210 at 2764.247 kb on + strand, within DvMF_2210 at 2764.255 kb on - strand, within DvMF_2210 at 2764.636 kb on + strand, within DvMF_2210 at 2764.641 kb on + strand, within DvMF_2210 at 2764.738 kb on - strand, within DvMF_2210 at 2764.819 kb on - strand, within DvMF_2210 at 2764.821 kb on + strand, within DvMF_2210 at 2764.929 kb on - strand at 2765.108 kb on + strand, within DvMF_2211 at 2765.109 kb on - strand, within DvMF_2211 at 2765.128 kb on + strand, within DvMF_2211 at 2765.131 kb on - strand, within DvMF_2211 at 2765.141 kb on - strand, within DvMF_2211 at 2765.256 kb on - strand, within DvMF_2211 at 2765.499 kb on - strand, within DvMF_2211 at 2765.510 kb on + strand, within DvMF_2211 at 2765.550 kb on - strand, within DvMF_2211 at 2765.679 kb on - strand, within DvMF_2211 at 2765.823 kb on - strand, within DvMF_2211 at 2765.868 kb on + strand at 2765.980 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 14 days starvation 37C remove 2,763,341 - +1.7 2,763,581 - DvMF_2209 0.40 +0.6 2,763,849 + DvMF_2209 0.76 +1.0 2,764,049 - -0.7 2,764,237 + DvMF_2210 0.19 -1.3 2,764,237 + DvMF_2210 0.19 +1.2 2,764,247 + DvMF_2210 0.21 -0.3 2,764,255 - DvMF_2210 0.21 -0.6 2,764,636 + DvMF_2210 0.63 +0.1 2,764,641 + DvMF_2210 0.63 -0.6 2,764,738 - DvMF_2210 0.74 +0.1 2,764,819 - DvMF_2210 0.82 -0.3 2,764,821 + DvMF_2210 0.83 -0.3 2,764,929 - -0.8 2,765,108 + DvMF_2211 0.13 -0.6 2,765,109 - DvMF_2211 0.14 -0.6 2,765,128 + DvMF_2211 0.16 -0.3 2,765,131 - DvMF_2211 0.16 -1.2 2,765,141 - DvMF_2211 0.17 -0.7 2,765,256 - DvMF_2211 0.29 -0.7 2,765,499 - DvMF_2211 0.55 +0.4 2,765,510 + DvMF_2211 0.56 -1.1 2,765,550 - DvMF_2211 0.61 -0.2 2,765,679 - DvMF_2211 0.74 -1.4 2,765,823 - DvMF_2211 0.90 +0.1 2,765,868 + -1.8 2,765,980 - +0.7
Or see this region's nucleotide sequence