Experiment: 14 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2152 and DvMF_2153 are separated by 57 nucleotides DvMF_2153 and DvMF_2154 are separated by 365 nucleotides
DvMF_2152: DvMF_2152 - thioesterase superfamily protein (RefSeq), at 2,681,821 to 2,682,255
_2152
DvMF_2153: DvMF_2153 - PAS modulated sigma54 specific transcriptional regulator, Fis family (RefSeq), at 2,682,313 to 2,684,127
_2153
DvMF_2154: DvMF_2154 - alanine dehydrogenase (RefSeq), at 2,684,493 to 2,685,608
_2154
Position (kb)
2682
2683
2684
2685 Strain fitness (log2 ratio)
-2
-1
0
1 at 2681.326 kb on + strand at 2681.334 kb on - strand at 2681.349 kb on - strand at 2681.484 kb on + strand at 2681.492 kb on - strand at 2681.525 kb on - strand at 2681.654 kb on - strand at 2681.656 kb on + strand at 2682.029 kb on - strand, within DvMF_2152 at 2682.265 kb on + strand at 2682.394 kb on - strand at 2682.892 kb on - strand, within DvMF_2153 at 2682.942 kb on - strand, within DvMF_2153 at 2683.085 kb on + strand, within DvMF_2153 at 2683.129 kb on - strand, within DvMF_2153 at 2683.381 kb on - strand, within DvMF_2153 at 2683.674 kb on - strand, within DvMF_2153 at 2683.701 kb on + strand, within DvMF_2153 at 2683.718 kb on + strand, within DvMF_2153 at 2683.875 kb on + strand, within DvMF_2153 at 2684.719 kb on - strand, within DvMF_2154 at 2684.986 kb on + strand, within DvMF_2154 at 2685.108 kb on - strand, within DvMF_2154
Per-strain Table
Position Strand Gene LocusTag Fraction 14 days starvation 37C remove 2,681,326 + -0.4 2,681,334 - -2.3 2,681,349 - -1.9 2,681,484 + -1.3 2,681,492 - -0.7 2,681,525 - +0.3 2,681,654 - -0.4 2,681,656 + -0.4 2,682,029 - DvMF_2152 0.48 -0.9 2,682,265 + -1.5 2,682,394 - -0.2 2,682,892 - DvMF_2153 0.32 +0.6 2,682,942 - DvMF_2153 0.35 -1.1 2,683,085 + DvMF_2153 0.43 -1.0 2,683,129 - DvMF_2153 0.45 -0.4 2,683,381 - DvMF_2153 0.59 -0.8 2,683,674 - DvMF_2153 0.75 -0.5 2,683,701 + DvMF_2153 0.76 +0.1 2,683,718 + DvMF_2153 0.77 -0.4 2,683,875 + DvMF_2153 0.86 -0.8 2,684,719 - DvMF_2154 0.20 +0.4 2,684,986 + DvMF_2154 0.44 -2.1 2,685,108 - DvMF_2154 0.55 +0.1
Or see this region's nucleotide sequence