Experiment: 14 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1927 and DvMF_1928 are separated by 231 nucleotides DvMF_1928 and DvMF_1929 are separated by 37 nucleotides
DvMF_1927: DvMF_1927 - glycosyl transferase family 2 (RefSeq), at 2,375,912 to 2,377,843
_1927
DvMF_1928: DvMF_1928 - FAD dependent oxidoreductase (RefSeq), at 2,378,075 to 2,379,457
_1928
DvMF_1929: DvMF_1929 - peptidase M24 (RefSeq), at 2,379,495 to 2,380,565
_1929
Position (kb)
2378
2379
2380 Strain fitness (log2 ratio)
-2
-1
0
1 at 2377.224 kb on + strand, within DvMF_1927 at 2377.338 kb on - strand, within DvMF_1927 at 2377.481 kb on - strand, within DvMF_1927 at 2377.539 kb on - strand, within DvMF_1927 at 2377.936 kb on + strand at 2378.059 kb on + strand at 2378.537 kb on + strand, within DvMF_1928 at 2378.620 kb on - strand, within DvMF_1928 at 2379.300 kb on + strand, within DvMF_1928 at 2379.335 kb on - strand at 2379.352 kb on - strand at 2379.422 kb on - strand at 2379.680 kb on + strand, within DvMF_1929 at 2379.688 kb on - strand, within DvMF_1929 at 2379.701 kb on + strand, within DvMF_1929 at 2379.778 kb on - strand, within DvMF_1929 at 2379.859 kb on - strand, within DvMF_1929 at 2379.859 kb on - strand, within DvMF_1929 at 2379.908 kb on + strand, within DvMF_1929 at 2380.075 kb on - strand, within DvMF_1929 at 2380.156 kb on - strand, within DvMF_1929 at 2380.187 kb on + strand, within DvMF_1929 at 2380.210 kb on + strand, within DvMF_1929 at 2380.210 kb on + strand, within DvMF_1929 at 2380.252 kb on + strand, within DvMF_1929 at 2380.260 kb on - strand, within DvMF_1929
Per-strain Table
Position Strand Gene LocusTag Fraction 14 days starvation 37C remove 2,377,224 + DvMF_1927 0.68 -0.3 2,377,338 - DvMF_1927 0.74 +1.1 2,377,481 - DvMF_1927 0.81 -0.2 2,377,539 - DvMF_1927 0.84 -0.5 2,377,936 + -1.3 2,378,059 + +0.1 2,378,537 + DvMF_1928 0.33 +0.3 2,378,620 - DvMF_1928 0.39 +0.5 2,379,300 + DvMF_1928 0.89 +0.5 2,379,335 - -0.0 2,379,352 - -0.8 2,379,422 - +1.1 2,379,680 + DvMF_1929 0.17 +0.3 2,379,688 - DvMF_1929 0.18 -1.8 2,379,701 + DvMF_1929 0.19 -0.9 2,379,778 - DvMF_1929 0.26 +0.4 2,379,859 - DvMF_1929 0.34 +0.2 2,379,859 - DvMF_1929 0.34 +0.3 2,379,908 + DvMF_1929 0.39 +0.3 2,380,075 - DvMF_1929 0.54 -0.2 2,380,156 - DvMF_1929 0.62 -0.5 2,380,187 + DvMF_1929 0.65 +0.3 2,380,210 + DvMF_1929 0.67 +0.9 2,380,210 + DvMF_1929 0.67 -0.2 2,380,252 + DvMF_1929 0.71 -1.3 2,380,260 - DvMF_1929 0.71 +0.7
Or see this region's nucleotide sequence