Experiment: 14 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1854 and DvMF_1855 are separated by 2 nucleotides DvMF_1855 and DvMF_1856 are separated by 56 nucleotides DvMF_1856 and DvMF_1857 are separated by 303 nucleotides
DvMF_1854: DvMF_1854 - NAD-dependent epimerase/dehydratase (RefSeq), at 2,268,427 to 2,269,359
_1854
DvMF_1855: DvMF_1855 - glycosyltransferase-like protein (RefSeq), at 2,269,362 to 2,270,138
_1855
DvMF_1856: DvMF_1856 - hypothetical protein (RefSeq), at 2,270,195 to 2,270,572
_1856
DvMF_1857: DvMF_1857 - hypothetical protein (RefSeq), at 2,270,876 to 2,271,508
_1857
Position (kb)
2269
2270
2271 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2268.667 kb on - strand, within DvMF_1854 at 2268.837 kb on + strand, within DvMF_1854 at 2268.937 kb on + strand, within DvMF_1854 at 2269.043 kb on - strand, within DvMF_1854 at 2269.068 kb on + strand, within DvMF_1854 at 2269.143 kb on - strand, within DvMF_1854 at 2269.143 kb on - strand, within DvMF_1854 at 2269.451 kb on + strand, within DvMF_1855 at 2269.478 kb on - strand, within DvMF_1855 at 2269.675 kb on - strand, within DvMF_1855 at 2269.675 kb on - strand, within DvMF_1855 at 2269.682 kb on - strand, within DvMF_1855 at 2269.754 kb on + strand, within DvMF_1855 at 2269.859 kb on - strand, within DvMF_1855 at 2269.879 kb on + strand, within DvMF_1855 at 2269.887 kb on - strand, within DvMF_1855 at 2270.019 kb on - strand, within DvMF_1855 at 2270.065 kb on - strand at 2270.065 kb on - strand at 2270.065 kb on - strand at 2270.065 kb on - strand at 2270.192 kb on + strand at 2270.712 kb on + strand at 2270.712 kb on + strand at 2270.836 kb on + strand at 2270.861 kb on - strand at 2270.904 kb on + strand at 2270.939 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 14 days starvation 37C remove 2,268,667 - DvMF_1854 0.26 -1.2 2,268,837 + DvMF_1854 0.44 -1.8 2,268,937 + DvMF_1854 0.55 -0.8 2,269,043 - DvMF_1854 0.66 +1.2 2,269,068 + DvMF_1854 0.69 +0.3 2,269,143 - DvMF_1854 0.77 -0.8 2,269,143 - DvMF_1854 0.77 -1.2 2,269,451 + DvMF_1855 0.11 -1.8 2,269,478 - DvMF_1855 0.15 -0.5 2,269,675 - DvMF_1855 0.40 -0.8 2,269,675 - DvMF_1855 0.40 -3.5 2,269,682 - DvMF_1855 0.41 -0.8 2,269,754 + DvMF_1855 0.50 -0.5 2,269,859 - DvMF_1855 0.64 -0.2 2,269,879 + DvMF_1855 0.67 -0.4 2,269,887 - DvMF_1855 0.68 -0.8 2,270,019 - DvMF_1855 0.85 -0.3 2,270,065 - +0.7 2,270,065 - -0.3 2,270,065 - -2.2 2,270,065 - +0.3 2,270,192 + +0.2 2,270,712 + -2.8 2,270,712 + -2.5 2,270,836 + -3.5 2,270,861 - -1.2 2,270,904 + -0.1 2,270,939 - +0.3
Or see this region's nucleotide sequence