Experiment: 14 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1802 and DvMF_1803 are separated by 164 nucleotides DvMF_1803 and DvMF_1804 are separated by 67 nucleotides DvMF_1804 and DvMF_1805 are separated by 29 nucleotides
DvMF_1802: DvMF_1802 - protein of unknown function DUF6 transmembrane (RefSeq), at 2,202,908 to 2,204,005
_1802
DvMF_1803: DvMF_1803 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq), at 2,204,170 to 2,204,874
_1803
DvMF_1804: DvMF_1804 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq), at 2,204,942 to 2,205,847
_1804
DvMF_1805: DvMF_1805 - Glyoxalase/bleomycin resistance protein/dioxygenase (RefSeq), at 2,205,877 to 2,206,491
_1805
Position (kb)
2204
2205
2206 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2203.996 kb on - strand at 2204.074 kb on - strand at 2204.076 kb on + strand at 2204.103 kb on + strand at 2204.111 kb on - strand at 2204.173 kb on - strand at 2204.542 kb on - strand, within DvMF_1803 at 2204.599 kb on + strand, within DvMF_1803 at 2204.604 kb on - strand, within DvMF_1803 at 2204.782 kb on + strand, within DvMF_1803 at 2204.945 kb on + strand at 2204.976 kb on - strand at 2205.011 kb on + strand at 2205.061 kb on - strand, within DvMF_1804 at 2205.103 kb on + strand, within DvMF_1804 at 2205.166 kb on - strand, within DvMF_1804 at 2205.248 kb on + strand, within DvMF_1804 at 2205.258 kb on + strand, within DvMF_1804 at 2205.515 kb on + strand, within DvMF_1804 at 2205.568 kb on + strand, within DvMF_1804 at 2205.571 kb on - strand, within DvMF_1804 at 2205.999 kb on + strand, within DvMF_1805 at 2206.065 kb on - strand, within DvMF_1805 at 2206.065 kb on - strand, within DvMF_1805 at 2206.196 kb on + strand, within DvMF_1805 at 2206.238 kb on + strand, within DvMF_1805 at 2206.241 kb on - strand, within DvMF_1805 at 2206.286 kb on + strand, within DvMF_1805
Per-strain Table
Position Strand Gene LocusTag Fraction 14 days starvation 37C remove 2,203,996 - -2.0 2,204,074 - -0.6 2,204,076 + -0.7 2,204,103 + -0.9 2,204,111 - +1.5 2,204,173 - -3.7 2,204,542 - DvMF_1803 0.53 -3.1 2,204,599 + DvMF_1803 0.61 +0.4 2,204,604 - DvMF_1803 0.62 -1.9 2,204,782 + DvMF_1803 0.87 -1.4 2,204,945 + -0.7 2,204,976 - -1.6 2,205,011 + -1.4 2,205,061 - DvMF_1804 0.13 -3.1 2,205,103 + DvMF_1804 0.18 -1.0 2,205,166 - DvMF_1804 0.25 +0.2 2,205,248 + DvMF_1804 0.34 +0.8 2,205,258 + DvMF_1804 0.35 -2.2 2,205,515 + DvMF_1804 0.63 -0.9 2,205,568 + DvMF_1804 0.69 -0.6 2,205,571 - DvMF_1804 0.69 -0.7 2,205,999 + DvMF_1805 0.20 -2.2 2,206,065 - DvMF_1805 0.31 -0.4 2,206,065 - DvMF_1805 0.31 +1.1 2,206,196 + DvMF_1805 0.52 -2.5 2,206,238 + DvMF_1805 0.59 +1.4 2,206,241 - DvMF_1805 0.59 -0.1 2,206,286 + DvMF_1805 0.67 -1.6
Or see this region's nucleotide sequence