Experiment: 14 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0931 and DvMF_0932 are separated by 10 nucleotides DvMF_0932 and DvMF_0933 are separated by 2 nucleotides DvMF_0933 and DvMF_0934 are separated by 103 nucleotides
DvMF_0931: DvMF_0931 - molybdopterin oxidoreductase (RefSeq), at 1,128,934 to 1,131,165
_0931
DvMF_0932: DvMF_0932 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 1,131,176 to 1,131,763
_0932
DvMF_0933: DvMF_0933 - molybdopterin-containing oxidoreductase membrane anchor subunit (RefSeq), at 1,131,766 to 1,132,599
_0933
DvMF_0934: DvMF_0934 - Tetratricopeptide domain protein (RefSeq), at 1,132,703 to 1,133,608
_0934
Position (kb)
1131
1132 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1130.546 kb on - strand, within DvMF_0931 at 1130.780 kb on - strand, within DvMF_0931 at 1130.838 kb on + strand, within DvMF_0931 at 1130.919 kb on + strand, within DvMF_0931 at 1130.919 kb on + strand, within DvMF_0931 at 1130.919 kb on + strand, within DvMF_0931 at 1130.933 kb on - strand, within DvMF_0931 at 1130.963 kb on - strand at 1131.019 kb on + strand at 1131.403 kb on + strand, within DvMF_0932 at 1131.404 kb on - strand, within DvMF_0932 at 1131.449 kb on - strand, within DvMF_0932 at 1131.535 kb on - strand, within DvMF_0932 at 1131.646 kb on + strand, within DvMF_0932 at 1131.646 kb on + strand, within DvMF_0932 at 1131.679 kb on - strand, within DvMF_0932 at 1131.756 kb on + strand at 1131.760 kb on - strand at 1131.793 kb on - strand at 1131.835 kb on - strand at 1132.115 kb on + strand, within DvMF_0933 at 1132.178 kb on + strand, within DvMF_0933 at 1132.178 kb on + strand, within DvMF_0933 at 1132.423 kb on + strand, within DvMF_0933 at 1132.431 kb on - strand, within DvMF_0933 at 1132.510 kb on - strand, within DvMF_0933 at 1132.589 kb on + strand at 1132.605 kb on + strand at 1132.694 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 14 days starvation 37C remove 1,130,546 - DvMF_0931 0.72 -0.7 1,130,780 - DvMF_0931 0.83 -2.2 1,130,838 + DvMF_0931 0.85 -1.1 1,130,919 + DvMF_0931 0.89 -0.7 1,130,919 + DvMF_0931 0.89 -0.8 1,130,919 + DvMF_0931 0.89 +0.0 1,130,933 - DvMF_0931 0.90 -1.3 1,130,963 - -0.4 1,131,019 + -0.4 1,131,403 + DvMF_0932 0.39 -1.1 1,131,404 - DvMF_0932 0.39 -0.2 1,131,449 - DvMF_0932 0.46 -1.5 1,131,535 - DvMF_0932 0.61 -0.4 1,131,646 + DvMF_0932 0.80 -2.8 1,131,646 + DvMF_0932 0.80 +1.0 1,131,679 - DvMF_0932 0.86 -1.2 1,131,756 + -2.0 1,131,760 - -1.3 1,131,793 - +0.1 1,131,835 - -0.8 1,132,115 + DvMF_0933 0.42 -0.2 1,132,178 + DvMF_0933 0.49 -0.6 1,132,178 + DvMF_0933 0.49 -0.6 1,132,423 + DvMF_0933 0.79 -0.5 1,132,431 - DvMF_0933 0.80 -0.1 1,132,510 - DvMF_0933 0.89 -0.9 1,132,589 + -0.5 1,132,605 + -2.1 1,132,694 - -1.7
Or see this region's nucleotide sequence