Experiment: 14 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0751 and DvMF_0752 are separated by 8 nucleotides DvMF_0752 and DvMF_0753 are separated by 285 nucleotides DvMF_0753 and DvMF_0754 overlap by 35 nucleotides DvMF_0754 and DvMF_0755 are separated by 42 nucleotides
DvMF_0751: DvMF_0751 - hypothetical protein (RefSeq), at 897,835 to 899,127
_0751
DvMF_0752: DvMF_0752 - hypothetical protein (RefSeq), at 899,136 to 899,693
_0752
DvMF_0753: DvMF_0753 - hypothetical protein (RefSeq), at 899,979 to 900,185
_0753
DvMF_0754: DvMF_0754 - putative DNA modification protein (RefSeq), at 900,151 to 900,882
_0754
DvMF_0755: DvMF_0755 - hypothetical protein (RefSeq), at 900,925 to 901,131
_0755
Position (kb) 899
900
901 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 899.146 kb on - strand at 899.158 kb on - strand at 899.211 kb on - strand, within DvMF_0752 at 899.219 kb on - strand, within DvMF_0752 at 899.248 kb on - strand, within DvMF_0752 at 899.930 kb on - strand at 899.931 kb on - strand at 900.161 kb on - strand at 900.161 kb on - strand at 900.161 kb on - strand at 900.194 kb on - strand at 900.199 kb on + strand at 900.553 kb on + strand, within DvMF_0754 at 900.688 kb on + strand, within DvMF_0754 at 900.792 kb on + strand, within DvMF_0754 at 900.832 kb on + strand at 901.055 kb on - strand, within DvMF_0755 at 901.137 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 14 days starvation 37C remove 899,146 - +0.4 899,158 - -0.4 899,211 - DvMF_0752 0.13 -3.3 899,219 - DvMF_0752 0.15 -0.5 899,248 - DvMF_0752 0.20 -2.1 899,930 - +0.0 899,931 - -2.8 900,161 - +0.4 900,161 - -0.5 900,161 - -1.1 900,194 - -1.2 900,199 + -0.8 900,553 + DvMF_0754 0.55 -2.4 900,688 + DvMF_0754 0.73 -1.1 900,792 + DvMF_0754 0.88 -0.1 900,832 + -0.9 901,055 - DvMF_0755 0.63 -1.4 901,137 + -2.4
Or see this region's nucleotide sequence