Experiment: 14 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0737 and DvMF_0738 overlap by 4 nucleotides DvMF_0738 and DvMF_0739 are separated by 1 nucleotides DvMF_0739 and DvMF_0740 overlap by 14 nucleotides DvMF_0740 and DvMF_0741 are separated by 187 nucleotides DvMF_0741 and DvMF_0742 are separated by 3 nucleotides
DvMF_0737: DvMF_0737 - protein of unknown function DUF1320 (RefSeq), at 885,398 to 885,817
_0737
DvMF_0738: DvMF_0738 - Domain of unknown function DUF1834 (RefSeq), at 885,814 to 886,434
_0738
DvMF_0739: DvMF_0739 - hypothetical protein (RefSeq), at 886,436 to 886,639
_0739
DvMF_0740: DvMF_0740 - Mu tail sheath family protein (RefSeq), at 886,626 to 888,047
_0740
DvMF_0741: DvMF_0741 - hypothetical protein (RefSeq), at 888,235 to 888,609
_0741
DvMF_0742: DvMF_0742 - hypothetical protein (RefSeq), at 888,613 to 888,942
_0742
Position (kb) 886
887
888
889 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 886.137 kb on - strand, within DvMF_0738 at 886.213 kb on + strand, within DvMF_0738 at 886.458 kb on + strand, within DvMF_0739 at 886.537 kb on - strand, within DvMF_0739 at 886.885 kb on + strand, within DvMF_0740 at 887.030 kb on + strand, within DvMF_0740 at 887.147 kb on + strand, within DvMF_0740 at 887.337 kb on - strand, within DvMF_0740 at 887.348 kb on + strand, within DvMF_0740 at 887.480 kb on - strand, within DvMF_0740 at 887.480 kb on - strand, within DvMF_0740 at 887.635 kb on - strand, within DvMF_0740 at 887.642 kb on - strand, within DvMF_0740 at 887.655 kb on - strand, within DvMF_0740 at 887.869 kb on + strand, within DvMF_0740 at 888.233 kb on - strand at 888.239 kb on - strand at 888.395 kb on - strand, within DvMF_0741 at 888.400 kb on - strand, within DvMF_0741 at 888.843 kb on + strand, within DvMF_0742
Per-strain Table
Position Strand Gene LocusTag Fraction 14 days starvation 37C remove 886,137 - DvMF_0738 0.52 -0.5 886,213 + DvMF_0738 0.64 -1.0 886,458 + DvMF_0739 0.11 -0.8 886,537 - DvMF_0739 0.50 -2.0 886,885 + DvMF_0740 0.18 -1.1 887,030 + DvMF_0740 0.28 -0.2 887,147 + DvMF_0740 0.37 -1.5 887,337 - DvMF_0740 0.50 +1.0 887,348 + DvMF_0740 0.51 -0.5 887,480 - DvMF_0740 0.60 +0.9 887,480 - DvMF_0740 0.60 -0.4 887,635 - DvMF_0740 0.71 -1.4 887,642 - DvMF_0740 0.71 -0.9 887,655 - DvMF_0740 0.72 -1.4 887,869 + DvMF_0740 0.87 -0.5 888,233 - -3.5 888,239 - -1.6 888,395 - DvMF_0741 0.43 -0.9 888,400 - DvMF_0741 0.44 -1.4 888,843 + DvMF_0742 0.70 +0.3
Or see this region's nucleotide sequence