Experiment: 14 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0254 and DvMF_0255 overlap by 14 nucleotides DvMF_0255 and DvMF_0256 are separated by 93 nucleotides DvMF_0256 and DvMF_0257 are separated by 317 nucleotides
DvMF_0254: DvMF_0254 - response regulator receiver modulated serine phosphatase (RefSeq), at 289,325 to 290,917
_0254
DvMF_0255: DvMF_0255 - D-tyrosyl-tRNA(Tyr) deacylase (RefSeq), at 290,904 to 291,458
_0255
DvMF_0256: DvMF_0256 - AMP-dependent synthetase and ligase (RefSeq), at 291,552 to 293,303
_0256
DvMF_0257: DvMF_0257 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (RefSeq), at 293,621 to 294,940
_0257
Position (kb) 291
292
293
294 Strain fitness (log2 ratio) -2
-1
0
1 at 290.736 kb on + strand, within DvMF_0254 at 290.980 kb on - strand, within DvMF_0255 at 291.663 kb on - strand at 291.670 kb on + strand at 291.670 kb on + strand at 291.678 kb on - strand at 291.678 kb on - strand at 291.844 kb on + strand, within DvMF_0256 at 291.850 kb on + strand, within DvMF_0256 at 291.850 kb on + strand, within DvMF_0256 at 292.186 kb on + strand, within DvMF_0256 at 292.246 kb on + strand, within DvMF_0256 at 292.888 kb on - strand, within DvMF_0256 at 292.902 kb on + strand, within DvMF_0256 at 293.009 kb on - strand, within DvMF_0256 at 293.101 kb on + strand, within DvMF_0256 at 293.157 kb on + strand at 293.294 kb on - strand at 293.306 kb on - strand at 293.438 kb on - strand at 293.620 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 14 days starvation 37C remove 290,736 + DvMF_0254 0.89 +0.1 290,980 - DvMF_0255 0.14 -0.7 291,663 - -0.0 291,670 + +1.7 291,670 + -0.1 291,678 - +0.5 291,678 - +1.5 291,844 + DvMF_0256 0.17 +1.0 291,850 + DvMF_0256 0.17 +0.8 291,850 + DvMF_0256 0.17 -0.2 292,186 + DvMF_0256 0.36 +1.7 292,246 + DvMF_0256 0.40 +0.3 292,888 - DvMF_0256 0.76 +0.5 292,902 + DvMF_0256 0.77 +1.1 293,009 - DvMF_0256 0.83 +0.5 293,101 + DvMF_0256 0.88 +0.6 293,157 + -0.4 293,294 - +0.4 293,306 - +0.2 293,438 - -1.2 293,620 + -2.2
Or see this region's nucleotide sequence