Experiment: 14 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0245 and DvMF_0246 are separated by 723 nucleotides DvMF_0246 and DvMF_0247 are separated by 66 nucleotides DvMF_0247 and DvMF_0248 are separated by 9 nucleotides
DvMF_0245: DvMF_0245 - hypothetical protein (RefSeq), at 277,587 to 277,982
_0245
DvMF_0246: DvMF_0246 - protein of unknown function DUF1078 domain protein (RefSeq), at 278,706 to 280,343
_0246
DvMF_0247: DvMF_0247 - flagellar hook capping protein (RefSeq), at 280,410 to 281,201
_0247
DvMF_0248: DvMF_0248 - flagellar hook-length control protein (RefSeq), at 281,211 to 283,106
_0248
Position (kb) 278
279
280
281 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 277.852 kb on + strand, within DvMF_0245 at 277.937 kb on + strand, within DvMF_0245 at 278.166 kb on + strand at 278.177 kb on + strand at 278.506 kb on - strand at 278.537 kb on - strand at 278.759 kb on - strand at 278.932 kb on + strand, within DvMF_0246 at 278.945 kb on + strand, within DvMF_0246 at 279.015 kb on + strand, within DvMF_0246 at 279.117 kb on + strand, within DvMF_0246 at 279.236 kb on + strand, within DvMF_0246 at 279.560 kb on - strand, within DvMF_0246 at 279.601 kb on + strand, within DvMF_0246 at 279.659 kb on + strand, within DvMF_0246 at 279.959 kb on + strand, within DvMF_0246 at 280.050 kb on - strand, within DvMF_0246 at 280.149 kb on + strand, within DvMF_0246 at 280.246 kb on + strand at 280.246 kb on + strand at 280.246 kb on + strand at 280.630 kb on + strand, within DvMF_0247 at 280.827 kb on + strand, within DvMF_0247 at 281.223 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 14 days starvation 37C remove 277,852 + DvMF_0245 0.67 -0.5 277,937 + DvMF_0245 0.88 -0.9 278,166 + -0.7 278,177 + -0.9 278,506 - -1.6 278,537 - -3.8 278,759 - +0.1 278,932 + DvMF_0246 0.14 +1.2 278,945 + DvMF_0246 0.15 +1.1 279,015 + DvMF_0246 0.19 -1.4 279,117 + DvMF_0246 0.25 +1.1 279,236 + DvMF_0246 0.32 +0.4 279,560 - DvMF_0246 0.52 +0.8 279,601 + DvMF_0246 0.55 +0.5 279,659 + DvMF_0246 0.58 +1.0 279,959 + DvMF_0246 0.76 +1.2 280,050 - DvMF_0246 0.82 +1.2 280,149 + DvMF_0246 0.88 +1.1 280,246 + +0.8 280,246 + +2.0 280,246 + +1.5 280,630 + DvMF_0247 0.28 +3.2 280,827 + DvMF_0247 0.53 +2.9 281,223 + +1.5
Or see this region's nucleotide sequence