Experiment: 14 days starvation 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0016 and DvMF_0017 are separated by 71 nucleotides DvMF_0017 and DvMF_0018 are separated by 3 nucleotides DvMF_0018 and DvMF_0019 are separated by 37 nucleotides
DvMF_0016: DvMF_0016 - transferase, putative (RefSeq), at 21,831 to 22,622
_0016
DvMF_0017: DvMF_0017 - Methyltransferase type 11 (RefSeq), at 22,694 to 23,458
_0017
DvMF_0018: DvMF_0018 - adenylylsulfate kinase (RefSeq), at 23,462 to 24,049
_0018
DvMF_0019: DvMF_0019 - hypothetical protein (RefSeq), at 24,087 to 25,421
_0019
Position (kb) 23
24
25 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 23.086 kb on + strand, within DvMF_0017 at 23.304 kb on + strand, within DvMF_0017 at 23.334 kb on + strand, within DvMF_0017 at 23.460 kb on - strand at 23.723 kb on - strand, within DvMF_0018 at 24.058 kb on + strand at 24.058 kb on + strand at 24.066 kb on - strand at 24.066 kb on - strand at 24.109 kb on - strand at 24.463 kb on + strand, within DvMF_0019 at 24.764 kb on + strand, within DvMF_0019 at 24.894 kb on + strand, within DvMF_0019 at 24.979 kb on + strand, within DvMF_0019 at 24.980 kb on - strand, within DvMF_0019 at 25.033 kb on - strand, within DvMF_0019 at 25.049 kb on + strand, within DvMF_0019
Per-strain Table
Position Strand Gene LocusTag Fraction 14 days starvation 37C remove 23,086 + DvMF_0017 0.51 +1.4 23,304 + DvMF_0017 0.80 -0.9 23,334 + DvMF_0017 0.84 -1.9 23,460 - -0.7 23,723 - DvMF_0018 0.44 +0.5 24,058 + -1.6 24,058 + -2.0 24,066 - +0.6 24,066 - -1.0 24,109 - +0.9 24,463 + DvMF_0019 0.28 -3.6 24,764 + DvMF_0019 0.51 -0.4 24,894 + DvMF_0019 0.60 -1.0 24,979 + DvMF_0019 0.67 -0.4 24,980 - DvMF_0019 0.67 -1.8 25,033 - DvMF_0019 0.71 +0.2 25,049 + DvMF_0019 0.72 -2.5
Or see this region's nucleotide sequence