Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3545

Experiment: m.b. Paraquat dichloride 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Paraquat dichloride 0.015 mg/ml
3,726,115	+		Dshi_3544	0.14	-0.1
3,726,150	+		Dshi_3544	0.17	+1.0
3,726,172	+		Dshi_3544	0.19	-0.1
3,726,223	-		Dshi_3544	0.23	+1.0
3,726,286	+		Dshi_3544	0.29	+0.4
3,726,309	-		Dshi_3544	0.31	+1.0
3,726,342	+		Dshi_3544	0.34	+0.2
3,726,350	-		Dshi_3544	0.35	-1.8
3,726,360	-		Dshi_3544	0.36	+0.2
3,726,416	-		Dshi_3544	0.41	-0.3
3,726,424	+		Dshi_3544	0.41	+0.7
3,726,601	+		Dshi_3544	0.57	-0.1
3,726,619	+		Dshi_3544	0.59	+1.2
3,726,644	+		Dshi_3544	0.61	+0.8
3,726,743	-		Dshi_3544	0.70	+0.9
3,726,783	-		Dshi_3544	0.73	+0.4
3,726,850	+		Dshi_3544	0.79	-0.2
3,726,858	-		Dshi_3544	0.80	+0.2
3,726,898	+		Dshi_3544	0.84	+0.6
3,726,967	+		Dshi_3544	0.90	+0.4
3,727,120	-				-0.8
3,727,123	+				-0.3
3,727,125	-				-0.1
3,727,298	+		Dshi_3545	0.27	-0.0
3,727,386	-		Dshi_3545	0.38	-0.0
3,727,539	+		Dshi_3545	0.57	+0.4
3,727,547	-		Dshi_3545	0.58	+1.0
3,727,550	+		Dshi_3545	0.59	+0.1
3,727,601	+		Dshi_3545	0.65	-1.6
3,727,609	-		Dshi_3545	0.66	-0.2
3,727,692	+		Dshi_3545	0.77	+0.1
3,727,692	-		Dshi_3545	0.77	-0.6
3,727,707	+		Dshi_3545	0.78	-2.0
3,727,848	+				-1.6
3,727,851	+				-0.5
3,727,881	-				-1.0
3,728,035	-				-0.8
3,728,186	+				-0.4
3,728,186	+				-1.0
3,728,187	-				-1.0
3,728,191	+				+2.0
3,728,194	-				-0.5
3,728,198	+				-1.3
3,728,218	+		Dshi_3546	0.11	-1.8
3,728,255	+		Dshi_3546	0.14	-0.0
3,728,271	-		Dshi_3546	0.16	-1.6
3,728,271	-		Dshi_3546	0.16	-2.6
3,728,441	+		Dshi_3546	0.30	-0.4
3,728,610	+		Dshi_3546	0.44	+1.0
3,728,684	-		Dshi_3546	0.50	-0.8
3,728,778	+		Dshi_3546	0.57	-2.7
3,728,840	+		Dshi_3546	0.62	-0.0