Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3486

Experiment: m.b. Paraquat dichloride 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Paraquat dichloride 0.015 mg/ml
3,666,332	-		Dshi_3485	0.29	-1.5
3,666,378	+		Dshi_3485	0.33	-1.1
3,666,391	+		Dshi_3485	0.34	-0.5
3,666,395	-		Dshi_3485	0.34	-1.1
3,666,395	-		Dshi_3485	0.34	-1.1
3,666,423	+		Dshi_3485	0.36	+1.5
3,666,452	-		Dshi_3485	0.38	-0.6
3,666,493	+		Dshi_3485	0.42	-2.7
3,666,535	-		Dshi_3485	0.45	-1.1
3,666,550	-		Dshi_3485	0.46	-0.0
3,666,563	-		Dshi_3485	0.47	-0.6
3,666,573	+		Dshi_3485	0.48	+1.0
3,666,573	+		Dshi_3485	0.48	-2.0
3,666,573	+		Dshi_3485	0.48	+0.2
3,666,573	+		Dshi_3485	0.48	+0.4
3,666,581	-		Dshi_3485	0.49	-0.0
3,666,597	-		Dshi_3485	0.50	-1.0
3,666,632	+		Dshi_3485	0.53	-1.3
3,666,739	-		Dshi_3485	0.61	+0.1
3,666,740	+		Dshi_3485	0.61	-1.2
3,666,810	+		Dshi_3485	0.67	-1.3
3,666,810	+		Dshi_3485	0.67	-1.3
3,666,810	+		Dshi_3485	0.67	-1.3
3,666,880	+		Dshi_3485	0.72	-0.6
3,667,110	+				-1.3
3,667,118	-				-0.0
3,667,140	-				-1.5
3,667,157	+				-0.6
3,667,227	+				-0.2
3,667,235	-				-0.2
3,667,235	-				+0.6
3,667,291	-				-0.3
3,667,367	+		Dshi_3486	0.23	-0.0
3,667,378	+		Dshi_3486	0.26	+0.8
3,667,485	-		Dshi_3486	0.49	+0.3
3,667,520	-		Dshi_3486	0.57	-0.6
3,667,525	-		Dshi_3486	0.58	+0.6
3,667,540	-		Dshi_3486	0.61	+1.3
3,667,561	+		Dshi_3486	0.66	+0.4
3,667,561	+		Dshi_3486	0.66	+0.0
3,667,616	+		Dshi_3486	0.78	+0.1
3,667,642	+		Dshi_3486	0.84	-0.2
3,667,720	+				-0.2
3,667,720	+				-0.6
3,667,740	+				+0.3
3,667,767	+				-0.2
3,667,774	+				+1.2
3,667,785	+				+0.6
3,667,795	+				+0.4
3,667,803	-				+0.7
3,667,803	-				-0.8
3,667,803	-				-0.3
3,667,818	-				-1.6
3,667,818	-				+1.4
3,667,826	-				-0.0
3,667,974	-		Dshi_3487	0.16	-0.0
3,668,209	+		Dshi_3487	0.40	+0.0
3,668,241	-		Dshi_3487	0.43	-0.0
3,668,269	-		Dshi_3487	0.46	+2.6
3,668,435	+		Dshi_3487	0.62	+0.3
3,668,517	+		Dshi_3487	0.70	+1.0
3,668,526	+		Dshi_3487	0.71	+2.0
3,668,527	-		Dshi_3487	0.71	-1.1
3,668,541	+		Dshi_3487	0.73	+1.0
3,668,546	+		Dshi_3487	0.73	-0.0
3,668,556	+		Dshi_3487	0.74	+1.3
3,668,607	-		Dshi_3487	0.79	-0.9
3,668,617	-		Dshi_3487	0.80	-0.4
3,668,635	-		Dshi_3487	0.82	-1.3
3,668,645	-		Dshi_3487	0.83	+0.5
3,668,703	-		Dshi_3487	0.89	-0.0
3,668,705	+		Dshi_3487	0.89	-1.0
3,668,708	-		Dshi_3487	0.89	+1.0