Experiment: m.b. Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2226 and Dshi_2227 are separated by 0 nucleotides Dshi_2227 and Dshi_2228 are separated by 72 nucleotides
Dshi_2226: Dshi_2226 - Glutamate--putrescine ligase (RefSeq), at 2,348,653 to 2,350,023
_2226
Dshi_2227: Dshi_2227 - FAD dependent oxidoreductase (RefSeq), at 2,350,024 to 2,351,328
_2227
Dshi_2228: Dshi_2228 - DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq), at 2,351,401 to 2,352,594
_2228
Position (kb)
2350
2351
2352 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2349.047 kb on - strand, within Dshi_2226 at 2349.312 kb on + strand, within Dshi_2226 at 2349.374 kb on + strand, within Dshi_2226 at 2349.435 kb on + strand, within Dshi_2226 at 2349.564 kb on - strand, within Dshi_2226 at 2349.574 kb on - strand, within Dshi_2226 at 2349.862 kb on - strand, within Dshi_2226 at 2349.954 kb on - strand at 2349.986 kb on + strand at 2350.135 kb on + strand at 2350.185 kb on - strand, within Dshi_2227 at 2350.207 kb on - strand, within Dshi_2227 at 2350.207 kb on - strand, within Dshi_2227 at 2350.414 kb on + strand, within Dshi_2227 at 2350.419 kb on + strand, within Dshi_2227 at 2350.461 kb on + strand, within Dshi_2227 at 2350.518 kb on - strand, within Dshi_2227 at 2350.598 kb on + strand, within Dshi_2227 at 2350.598 kb on - strand, within Dshi_2227 at 2350.653 kb on - strand, within Dshi_2227 at 2350.771 kb on + strand, within Dshi_2227 at 2350.841 kb on + strand, within Dshi_2227 at 2350.869 kb on - strand, within Dshi_2227 at 2351.297 kb on + strand at 2351.496 kb on - strand at 2351.501 kb on + strand at 2351.565 kb on + strand, within Dshi_2228 at 2351.573 kb on - strand, within Dshi_2228 at 2351.674 kb on + strand, within Dshi_2228 at 2351.689 kb on - strand, within Dshi_2228 at 2351.827 kb on - strand, within Dshi_2228 at 2351.859 kb on + strand, within Dshi_2228 at 2351.877 kb on + strand, within Dshi_2228 at 2351.902 kb on + strand, within Dshi_2228 at 2351.910 kb on - strand, within Dshi_2228 at 2352.116 kb on - strand, within Dshi_2228 at 2352.125 kb on + strand, within Dshi_2228 at 2352.243 kb on + strand, within Dshi_2228 at 2352.243 kb on + strand, within Dshi_2228 at 2352.248 kb on + strand, within Dshi_2228 at 2352.278 kb on - strand, within Dshi_2228
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.015 mg/ml remove 2,349,047 - Dshi_2226 0.29 +0.9 2,349,312 + Dshi_2226 0.48 -0.2 2,349,374 + Dshi_2226 0.53 +0.6 2,349,435 + Dshi_2226 0.57 +1.0 2,349,564 - Dshi_2226 0.66 +3.0 2,349,574 - Dshi_2226 0.67 +1.8 2,349,862 - Dshi_2226 0.88 +1.2 2,349,954 - -0.7 2,349,986 + +0.9 2,350,135 + -0.2 2,350,185 - Dshi_2227 0.12 -0.9 2,350,207 - Dshi_2227 0.14 -1.2 2,350,207 - Dshi_2227 0.14 -0.7 2,350,414 + Dshi_2227 0.30 -2.1 2,350,419 + Dshi_2227 0.30 +0.4 2,350,461 + Dshi_2227 0.33 +1.2 2,350,518 - Dshi_2227 0.38 -4.6 2,350,598 + Dshi_2227 0.44 -0.9 2,350,598 - Dshi_2227 0.44 -1.2 2,350,653 - Dshi_2227 0.48 -0.6 2,350,771 + Dshi_2227 0.57 -2.0 2,350,841 + Dshi_2227 0.63 -2.8 2,350,869 - Dshi_2227 0.65 +1.8 2,351,297 + -0.9 2,351,496 - -0.2 2,351,501 + -0.4 2,351,565 + Dshi_2228 0.14 -0.2 2,351,573 - Dshi_2228 0.14 -0.3 2,351,674 + Dshi_2228 0.23 +2.8 2,351,689 - Dshi_2228 0.24 +0.5 2,351,827 - Dshi_2228 0.36 +0.9 2,351,859 + Dshi_2228 0.38 +0.8 2,351,877 + Dshi_2228 0.40 +0.9 2,351,902 + Dshi_2228 0.42 +0.6 2,351,910 - Dshi_2228 0.43 -0.7 2,352,116 - Dshi_2228 0.60 +0.5 2,352,125 + Dshi_2228 0.61 +0.0 2,352,243 + Dshi_2228 0.71 +0.5 2,352,243 + Dshi_2228 0.71 -0.1 2,352,248 + Dshi_2228 0.71 +0.2 2,352,278 - Dshi_2228 0.73 -0.2
Or see this region's nucleotide sequence