Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2121

Experiment: m.b. Paraquat dichloride 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Paraquat dichloride 0.015 mg/ml
2,250,959	-		Dshi_2120	0.14	-0.7
2,251,063	+		Dshi_2120	0.24	+0.2
2,251,071	-		Dshi_2120	0.24	-0.3
2,251,078	-		Dshi_2120	0.25	-0.5
2,251,089	+		Dshi_2120	0.26	+0.3
2,251,094	+		Dshi_2120	0.26	-0.1
2,251,107	-		Dshi_2120	0.27	+0.2
2,251,154	-		Dshi_2120	0.32	+0.7
2,251,229	-		Dshi_2120	0.38	+0.7
2,251,252	-		Dshi_2120	0.40	+0.7
2,251,252	-		Dshi_2120	0.40	-2.3
2,251,270	+		Dshi_2120	0.42	+1.3
2,251,300	-		Dshi_2120	0.45	-1.1
2,251,305	+		Dshi_2120	0.45	+0.5
2,251,325	+		Dshi_2120	0.47	+1.0
2,251,363	+		Dshi_2120	0.50	-0.2
2,251,367	-		Dshi_2120	0.50	+0.2
2,251,387	+		Dshi_2120	0.52	+0.5
2,251,422	-		Dshi_2120	0.55	-0.3
2,251,444	+		Dshi_2120	0.57	-0.2
2,251,447	+		Dshi_2120	0.58	-1.1
2,251,459	+		Dshi_2120	0.59	+0.5
2,251,459	+		Dshi_2120	0.59	+0.5
2,251,464	+		Dshi_2120	0.59	-0.8
2,251,464	+		Dshi_2120	0.59	+1.7
2,251,473	-		Dshi_2120	0.60	-0.6
2,251,484	-		Dshi_2120	0.61	-0.0
2,251,487	+		Dshi_2120	0.61	-0.7
2,251,688	+		Dshi_2120	0.79	+0.1
2,251,768	-		Dshi_2120	0.86	-0.1
2,251,890	+				-2.1
2,251,898	-				+0.7
2,251,898	-				-0.3
2,251,937	+				-0.9
2,252,019	-		Dshi_2121	0.12	+0.7
2,252,236	+		Dshi_2121	0.39	-0.4
2,252,274	+		Dshi_2121	0.44	+1.3
2,252,294	-		Dshi_2121	0.46	+1.4
2,252,294	-		Dshi_2121	0.46	-0.8
2,252,294	-		Dshi_2121	0.46	+0.5
2,252,304	-		Dshi_2121	0.48	-1.4
2,252,374	-		Dshi_2121	0.57	+0.6
2,252,403	+		Dshi_2121	0.60	-0.3
2,252,411	-		Dshi_2121	0.61	+0.1
2,252,422	-		Dshi_2121	0.63	+0.1
2,252,460	-		Dshi_2121	0.67	+0.0
2,252,515	-		Dshi_2121	0.74	+0.6
2,252,556	-		Dshi_2121	0.79	+0.6
2,252,561	-		Dshi_2121	0.80	+0.6
2,252,561	-		Dshi_2121	0.80	+0.7
2,252,570	-		Dshi_2121	0.81	-1.3
2,252,580	-		Dshi_2121	0.82	-0.3
2,252,592	-		Dshi_2121	0.84	+0.2
2,252,597	-		Dshi_2121	0.84	+0.2
2,252,624	+		Dshi_2121	0.88	-0.7
2,252,632	-		Dshi_2121	0.89	+0.5
2,252,663	+				+0.7
2,252,671	-				-0.0
2,252,694	+				-1.3
2,252,736	+				-0.3
2,252,736	+				-0.1
2,252,736	+				+0.4
2,252,744	-				+0.0
2,252,768	+				-0.0
2,252,786	-				-1.1
2,252,788	+				-0.3
2,252,796	-				-0.5
2,252,864	+		Dshi_2122	0.17	-0.3
2,252,864	+		Dshi_2122	0.17	-0.0
2,252,870	+		Dshi_2122	0.17	-1.2
2,252,880	+		Dshi_2122	0.19	+0.2
2,252,956	-		Dshi_2122	0.28	+1.3
2,252,957	-		Dshi_2122	0.28	-0.7
2,252,963	-		Dshi_2122	0.28	-0.3
2,252,987	+		Dshi_2122	0.31	-0.1
2,253,020	+		Dshi_2122	0.35	+0.4
2,253,066	-		Dshi_2122	0.41	+0.4
2,253,067	-		Dshi_2122	0.41	+0.7
2,253,087	-		Dshi_2122	0.43	-0.8
2,253,097	-				+0.7
2,253,133	+		Dshi_2122	0.49	-0.6
2,253,141	+		Dshi_2122	0.50	-0.8
2,253,141	-		Dshi_2122	0.50	-0.4
2,253,152	+		Dshi_2122	0.51	-1.5
2,253,157	+		Dshi_2122	0.51	+0.3
2,253,165	-		Dshi_2122	0.52	+0.4
2,253,180	-		Dshi_2122	0.54	-0.3
2,253,206	+		Dshi_2122	0.57	-2.1
2,253,211	+		Dshi_2122	0.58	-0.8
2,253,227	-		Dshi_2122	0.60	-0.3
2,253,227	-		Dshi_2122	0.60	-0.7
2,253,235	+		Dshi_2122	0.61	-0.4
2,253,285	+		Dshi_2122	0.67	-0.6
2,253,285	+		Dshi_2122	0.67	-0.4
2,253,285	+		Dshi_2122	0.67	-0.3
2,253,293	-		Dshi_2122	0.67	-0.1
2,253,293	-		Dshi_2122	0.67	-0.4
2,253,304	+		Dshi_2122	0.69	+0.2
2,253,328	+		Dshi_2122	0.72	+2.2
2,253,328	+		Dshi_2122	0.72	+0.0
2,253,331	+		Dshi_2122	0.72	-0.8
2,253,350	+		Dshi_2122	0.74	+0.7
2,253,350	+		Dshi_2122	0.74	-2.3
2,253,352	-		Dshi_2122	0.74	-0.3
2,253,352	-		Dshi_2122	0.74	-1.2
2,253,357	-		Dshi_2122	0.75	-0.3
2,253,358	-		Dshi_2122	0.75	-0.6
2,253,385	-		Dshi_2122	0.78	-0.7
2,253,385	-		Dshi_2122	0.78	+0.0
2,253,394	+		Dshi_2122	0.79	-0.9
2,253,402	-		Dshi_2122	0.80	-0.8
2,253,455	+		Dshi_2122	0.87	+0.4
2,253,455	+		Dshi_2122	0.87	-1.0
2,253,455	+		Dshi_2122	0.87	+1.7
2,253,455	+		Dshi_2122	0.87	-0.6
2,253,455	+		Dshi_2122	0.87	+0.2
2,253,455	+		Dshi_2122	0.87	-1.7
2,253,464	-		Dshi_2122	0.88	+1.3
2,253,514	+				-1.6
2,253,514	+				-0.3
2,253,514	+				+1.2
2,253,514	+				-0.2
2,253,514	+				+0.9
2,253,522	-				-1.3
2,253,522	-				-0.7
2,253,522	-				-0.8
2,253,532	-				-0.1
2,253,611	+				-0.1
2,253,626	+				-0.1
2,253,634	-				+0.4
2,253,638	-				+0.1
2,253,660	-				-2.4
2,253,664	+				-0.5
2,253,664	+				+0.6
2,253,672	-				-0.5
2,253,683	+				-1.0
2,253,691	-				+0.1
2,253,691	-				-0.3
2,253,691	-				-0.6
2,253,700	+				-0.3
2,253,701	-				-0.3
2,253,705	+				+0.1
2,253,719	+				-1.1
2,253,720	+				-0.6